Detailed information NTG0061142

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BASU_RS16540
• Genome accession: NC_022081
• Coordinates: 3369261..3370424 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis UCMB5113
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3364261..3375424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BASU_RS16510 (BASU_3176)	-	3364525..3364944 (-)	420	WP_007407479.1	TIGR03826 family flagellar region protein	-
BASU_RS16515 (BASU_3177)	comFC	3365018..3365707 (-)	690	WP_197538283.1	phosphoribosyltransferase family protein	Machinery gene
BASU_RS16520 (BASU_3178)	-	3365713..3365997 (-)	285	WP_007407481.1	competence protein ComFB	-
BASU_RS16525 (BASU_3179)	comFA	3366055..3367440 (-)	1386	WP_020956417.1	DEAD/DEAH box helicase	Machinery gene
BASU_RS16530 (BASU_3180)	-	3367549..3368397 (-)	849	WP_007407483.1	DegV family protein	-
BASU_RS16535 (BASU_3181)	degU	3368495..3369184 (-)	690	WP_020956418.1	two-component system response regulator DegU	Regulator
BASU_RS16540 (BASU_3182)	degS	3369261..3370424 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
BASU_RS16545 (BASU_3183)	-	3370647..3371294 (+)	648	WP_007614107.1	YigZ family protein	-
BASU_RS16550 (BASU_3184)	-	3371299..3372519 (+)	1221	WP_020956419.1	LCP family protein	-
BASU_RS16555 (BASU_3185)	-	3372626..3373702 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
BASU_RS16560 (BASU_3186)	-	3373835..3375031 (-)	1197	WP_007407487.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=61142 BASU_RS16540 WP_007407484.1 3369261..3370424(-) (degS) [Bacillus velezensis UCMB5113]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=61142 BASU_RS16540 WP_007407484.1 3369261..3370424(-) (degS) [Bacillus velezensis UCMB5113]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951