Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LA387_RS08865 Genome accession   NZ_CP084377
Coordinates   1731210..1732457 (+) Length   415 a.a.
NCBI ID   WP_003133508.1    Uniprot ID   -
Organism   Lactococcus garvieae strain Lg-Granada     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1726210..1737457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LA387_RS08835 htrA 1726251..1727468 (-) 1218 WP_003133516.1 S1C family serine protease Regulator
  LA387_RS08840 rlmH 1727772..1728251 (+) 480 WP_003133515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LA387_RS08845 - 1728248..1728895 (+) 648 WP_003133514.1 DNA alkylation repair protein -
  LA387_RS08850 yajC 1728970..1729305 (+) 336 WP_003133513.1 preprotein translocase subunit YajC -
  LA387_RS08855 - 1729506..1730243 (+) 738 WP_003133511.1 isoprenyl transferase -
  LA387_RS08860 - 1730240..1731034 (+) 795 WP_003133509.1 phosphatidate cytidylyltransferase -
  LA387_RS08865 eeP 1731210..1732457 (+) 1248 WP_003133508.1 RIP metalloprotease RseP Regulator
  LA387_RS08870 - 1732484..1734334 (+) 1851 WP_003133504.1 proline--tRNA ligase -
  LA387_RS11280 - 1735253..1735855 (+) 603 Protein_1731 PolC-type DNA polymerase III N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45065.51 Da        Isoelectric Point: 5.8048

>NTDB_id=610871 LA387_RS08865 WP_003133508.1 1731210..1732457(+) (eeP) [Lactococcus garvieae strain Lg-Granada]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLVIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGEIKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQPKDKIQAVNGEKTGNWQEVVQ
RISANDGSEIKLDIERDGASKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANAATLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSIIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=610871 LA387_RS08865 WP_003133508.1 1731210..1732457(+) (eeP) [Lactococcus garvieae strain Lg-Granada]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAATATGGTCATCTGTTCTTTGC
CAAACGCGCGGGGATTTTAGTTCGCGAGTTTTCCATTGGAATGGGGCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CATTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTACGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGGACCCCGGCATCTTTGGTGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAACGGGTAACTTTGGAAAA
CAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCTCTTTTCATTGAAGGAGAAGTTTTTGGTGAAATAAAAC
GTTATTCAGTTGACCATGACGCAACAATTATTGAAGCTGATGGAACGGAACTTCGTATCGCTCCACGAGATGTACAATAT
CAAAGTGCTAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGCCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATCATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTGCAATCGGGTACCCCTGCTT
ATTCGGCAGGTTTACAGCCAAAAGATAAAATCCAAGCAGTCAATGGCGAAAAAACGGGCAACTGGCAAGAAGTTGTCCAA
CGGATTAGTGCAAATGACGGCAGTGAAATCAAGCTGGATATTGAACGGGATGGCGCATCAAAGACACTAGAGCTCAAACC
AGAAAAAATTGACGGAAGATATCGCATTGGTATCACTCAGACAATTAAAACGGGCTTTTTAGATAAACTAACGGGTGGCT
TTACCCAAGCTGCTAACGCAGCCACACTGATATTTAAAGCTTTAGGCAATCTTATAGCACAGCCAAGTCTTGATAAACTT
GGTGGACCTGTCGCTATTTATGATTTAAGTGGACAAGCAGCCCGAGAAGGACTATTATCCATCATCGCTTTACTTGCCAT
GCTCTCAATCAATCTGGGAATCGTCAATTTAATCCCAATTCCCGTCCTTGACGGAGGGAAAATCGTCCTCAATATTGTTG
AGGCCTTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTGGGTCTTGTCTTTATGGTGGTTCTG
ATGATTGCTGTGACTTGGAATGATATTCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.325

100

0.569

  eeP Streptococcus thermophilus LMD-9

56.086

100

0.566