Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | M493_RS11705 | Genome accession | NC_022080 |
| Coordinates | 2355148..2355444 (-) | Length | 98 a.a. |
| NCBI ID | WP_020960567.1 | Uniprot ID | S5ZQQ9 |
| Organism | Geobacillus genomosp. 3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2350148..2360444
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M493_RS11670 (M493_12595) | - | 2350525..2352189 (+) | 1665 | WP_020960560.1 | DEAD/DEAH box helicase | - |
| M493_RS11675 (M493_12600) | - | 2352176..2352970 (+) | 795 | WP_020960561.1 | YqhG family protein | - |
| M493_RS11680 (M493_12605) | - | 2353047..2353226 (-) | 180 | WP_020960562.1 | YqzE family protein | - |
| M493_RS11685 (M493_12610) | comGG | 2353274..2353663 (-) | 390 | WP_020960563.1 | competence type IV pilus minor pilin ComGG | - |
| M493_RS11690 (M493_12615) | comGF | 2353992..2354432 (-) | 441 | WP_020960564.1 | competence type IV pilus minor pilin ComGF | - |
| M493_RS11695 (M493_12620) | - | 2354411..2354737 (-) | 327 | WP_020960565.1 | type II secretion system protein | - |
| M493_RS11700 (M493_12625) | comGD | 2354721..2355158 (-) | 438 | WP_020960566.1 | competence type IV pilus minor pilin ComGD | - |
| M493_RS11705 (M493_12630) | comGC | 2355148..2355444 (-) | 297 | WP_020960567.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M493_RS11710 (M493_12635) | comGB | 2355512..2356540 (-) | 1029 | WP_020960568.1 | competence type IV pilus assembly protein ComGB | - |
| M493_RS11715 (M493_12640) | comGA | 2356537..2357628 (-) | 1092 | WP_041267964.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M493_RS11720 (M493_12645) | - | 2357806..2358504 (+) | 699 | WP_020960570.1 | helix-turn-helix transcriptional regulator | - |
| M493_RS11725 (M493_12650) | - | 2358669..2358911 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| M493_RS11730 (M493_12655) | - | 2358942..2360069 (-) | 1128 | WP_020960571.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10725.48 Da Isoelectric Point: 4.7468
>NTDB_id=61054 M493_RS11705 WP_020960567.1 2355148..2355444(-) (comGC) [Geobacillus genomosp. 3]
MNEKGFTLIEMLIVLMVISVLLLVAIPNITKHNGMINDKGCEALVNTVQAQVKAYEMEHNKIPTIQELLDGGYIKSDKCP
NGRAIQINENGDVSEVGS
MNEKGFTLIEMLIVLMVISVLLLVAIPNITKHNGMINDKGCEALVNTVQAQVKAYEMEHNKIPTIQELLDGGYIKSDKCP
NGRAIQINENGDVSEVGS
Nucleotide
Download Length: 297 bp
>NTDB_id=61054 M493_RS11705 WP_020960567.1 2355148..2355444(-) (comGC) [Geobacillus genomosp. 3]
GTGAACGAAAAAGGATTTACACTCATTGAAATGCTGATTGTGTTAATGGTCATTTCGGTGTTGCTGTTAGTGGCGATTCC
GAACATTACGAAGCATAACGGCATGATCAACGACAAAGGATGTGAGGCGCTTGTCAATACGGTGCAGGCGCAAGTGAAGG
CATATGAGATGGAGCATAACAAAATTCCAACCATTCAAGAATTGCTCGATGGCGGGTATATTAAATCAGATAAATGCCCA
AACGGCCGTGCGATCCAAATTAACGAGAACGGCGATGTGAGCGAAGTTGGCTCGTAA
GTGAACGAAAAAGGATTTACACTCATTGAAATGCTGATTGTGTTAATGGTCATTTCGGTGTTGCTGTTAGTGGCGATTCC
GAACATTACGAAGCATAACGGCATGATCAACGACAAAGGATGTGAGGCGCTTGTCAATACGGTGCAGGCGCAAGTGAAGG
CATATGAGATGGAGCATAACAAAATTCCAACCATTCAAGAATTGCTCGATGGCGGGTATATTAAATCAGATAAATGCCCA
AACGGCCGTGCGATCCAAATTAACGAGAACGGCGATGTGAGCGAAGTTGGCTCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
57.471 |
88.776 |
0.51 |
| comGC | Staphylococcus aureus MW2 |
44.086 |
94.898 |
0.418 |
| comGC | Staphylococcus aureus N315 |
44.086 |
94.898 |
0.418 |