Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | M493_RS11715 | Genome accession | NC_022080 |
| Coordinates | 2356537..2357628 (-) | Length | 363 a.a. |
| NCBI ID | WP_041267964.1 | Uniprot ID | - |
| Organism | Geobacillus genomosp. 3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2351537..2362628
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M493_RS11675 (M493_12600) | - | 2352176..2352970 (+) | 795 | WP_020960561.1 | YqhG family protein | - |
| M493_RS11680 (M493_12605) | - | 2353047..2353226 (-) | 180 | WP_020960562.1 | YqzE family protein | - |
| M493_RS11685 (M493_12610) | comGG | 2353274..2353663 (-) | 390 | WP_020960563.1 | competence type IV pilus minor pilin ComGG | - |
| M493_RS11690 (M493_12615) | comGF | 2353992..2354432 (-) | 441 | WP_020960564.1 | competence type IV pilus minor pilin ComGF | - |
| M493_RS11695 (M493_12620) | - | 2354411..2354737 (-) | 327 | WP_020960565.1 | type II secretion system protein | - |
| M493_RS11700 (M493_12625) | comGD | 2354721..2355158 (-) | 438 | WP_020960566.1 | competence type IV pilus minor pilin ComGD | - |
| M493_RS11705 (M493_12630) | comGC | 2355148..2355444 (-) | 297 | WP_020960567.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M493_RS11710 (M493_12635) | comGB | 2355512..2356540 (-) | 1029 | WP_020960568.1 | competence type IV pilus assembly protein ComGB | - |
| M493_RS11715 (M493_12640) | comGA | 2356537..2357628 (-) | 1092 | WP_041267964.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M493_RS11720 (M493_12645) | - | 2357806..2358504 (+) | 699 | WP_020960570.1 | helix-turn-helix transcriptional regulator | - |
| M493_RS11725 (M493_12650) | - | 2358669..2358911 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| M493_RS11730 (M493_12655) | - | 2358942..2360069 (-) | 1128 | WP_020960571.1 | class I SAM-dependent methyltransferase | - |
| M493_RS11735 (M493_12660) | - | 2360328..2360960 (-) | 633 | WP_020960572.1 | MBL fold metallo-hydrolase | - |
| M493_RS17760 (M493_12670) | - | 2361140..2361316 (+) | 177 | WP_020960573.1 | DUF2759 domain-containing protein | - |
| M493_RS11745 (M493_12675) | - | 2361351..2362514 (-) | 1164 | WP_020960574.1 | M14 family metallopeptidase | - |
Sequence
Protein
Download Length: 363 a.a. Molecular weight: 40584.79 Da Isoelectric Point: 7.7655
>NTDB_id=61055 M493_RS11715 WP_041267964.1 2356537..2357628(-) (comGA) [Geobacillus genomosp. 3]
MEGREYALDDIEQVANRLLAEAVQRRASDLHLIPRRHDAAIRLRVDGMLIDVGTLPKEIAERVIVHFKFLADMDIGERRR
PQSGAMEVNESGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFSHSTARLFSFMQQPQGLILLTGPTGSGKTTT
LYTLLDVCQAERQRNIITLEDPVEKRNDRFLQVQINEKAGITYAASLKAALRHDPDVLMVGEIRDHDTAAIAVRSSLSGH
LVVSTMHAADAVGAVYRLHEFGVPPGDLAETLLAVSAQRLVELCCPLCGDDCHPACRRLQRRRRAAVHELLYGPELMNVI
RSLSDSDGRRPRRHMTLGRLIRKGIALGYLPTRALELAEGGER
MEGREYALDDIEQVANRLLAEAVQRRASDLHLIPRRHDAAIRLRVDGMLIDVGTLPKEIAERVIVHFKFLADMDIGERRR
PQSGAMEVNESGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFSHSTARLFSFMQQPQGLILLTGPTGSGKTTT
LYTLLDVCQAERQRNIITLEDPVEKRNDRFLQVQINEKAGITYAASLKAALRHDPDVLMVGEIRDHDTAAIAVRSSLSGH
LVVSTMHAADAVGAVYRLHEFGVPPGDLAETLLAVSAQRLVELCCPLCGDDCHPACRRLQRRRRAAVHELLYGPELMNVI
RSLSDSDGRRPRRHMTLGRLIRKGIALGYLPTRALELAEGGER
Nucleotide
Download Length: 1092 bp
>NTDB_id=61055 M493_RS11715 WP_041267964.1 2356537..2357628(-) (comGA) [Geobacillus genomosp. 3]
ATGGAAGGGAGGGAATATGCGCTGGATGATATCGAACAAGTAGCGAACCGTCTCCTCGCTGAAGCGGTGCAGCGCCGCGC
CTCTGACCTTCACCTCATTCCGCGCCGCCATGATGCGGCCATCCGCCTCCGTGTTGACGGCATGCTCATCGATGTTGGTA
CGCTCCCGAAAGAGATCGCCGAACGCGTCATCGTGCATTTCAAATTTTTAGCCGACATGGATATCGGTGAACGGCGCCGT
CCGCAAAGCGGGGCGATGGAAGTAAACGAATCCGGGGAAACGGTCTATTTGCGCTTATCGACGCTGCCGACGCTTTACGA
CGAAAGCCTCGTCATCCGCCTCTTGCCGCAGCGCTTTTCGCTGCCGCTTCGCGAACTATCCTTATTTTCCCACTCCACCG
CACGATTGTTTTCCTTTATGCAGCAGCCGCAAGGGCTCATATTGCTGACCGGCCCGACCGGGTCGGGAAAGACGACGACG
TTGTACACCCTTCTTGATGTTTGTCAAGCGGAAAGACAGCGCAACATCATCACATTGGAAGATCCAGTCGAAAAACGAAA
TGACCGGTTTTTGCAAGTGCAGATCAATGAAAAAGCAGGCATCACGTATGCGGCCAGCTTGAAAGCCGCTTTGCGCCATG
ATCCGGATGTGTTAATGGTCGGGGAAATCCGCGATCATGATACGGCGGCCATCGCCGTGCGGTCATCGTTGAGCGGACAC
TTGGTCGTGTCGACCATGCATGCCGCGGATGCCGTCGGTGCGGTGTACCGGCTGCATGAATTCGGTGTGCCACCCGGCGA
CTTGGCTGAAACGCTGCTTGCCGTTTCGGCGCAGCGCCTTGTCGAGCTATGCTGTCCGCTATGTGGCGACGATTGCCATC
CGGCGTGTCGCCGGCTTCAACGCAGACGGCGTGCCGCCGTCCATGAACTGCTTTACGGACCGGAGCTTATGAATGTCATC
CGTTCGCTGTCGGACAGTGATGGGCGACGGCCCCGCCGCCATATGACATTAGGGCGCCTCATCCGCAAGGGAATCGCGCT
TGGTTATTTGCCGACCCGCGCGCTTGAGCTTGCCGAAGGGGGAGAGCGATGA
ATGGAAGGGAGGGAATATGCGCTGGATGATATCGAACAAGTAGCGAACCGTCTCCTCGCTGAAGCGGTGCAGCGCCGCGC
CTCTGACCTTCACCTCATTCCGCGCCGCCATGATGCGGCCATCCGCCTCCGTGTTGACGGCATGCTCATCGATGTTGGTA
CGCTCCCGAAAGAGATCGCCGAACGCGTCATCGTGCATTTCAAATTTTTAGCCGACATGGATATCGGTGAACGGCGCCGT
CCGCAAAGCGGGGCGATGGAAGTAAACGAATCCGGGGAAACGGTCTATTTGCGCTTATCGACGCTGCCGACGCTTTACGA
CGAAAGCCTCGTCATCCGCCTCTTGCCGCAGCGCTTTTCGCTGCCGCTTCGCGAACTATCCTTATTTTCCCACTCCACCG
CACGATTGTTTTCCTTTATGCAGCAGCCGCAAGGGCTCATATTGCTGACCGGCCCGACCGGGTCGGGAAAGACGACGACG
TTGTACACCCTTCTTGATGTTTGTCAAGCGGAAAGACAGCGCAACATCATCACATTGGAAGATCCAGTCGAAAAACGAAA
TGACCGGTTTTTGCAAGTGCAGATCAATGAAAAAGCAGGCATCACGTATGCGGCCAGCTTGAAAGCCGCTTTGCGCCATG
ATCCGGATGTGTTAATGGTCGGGGAAATCCGCGATCATGATACGGCGGCCATCGCCGTGCGGTCATCGTTGAGCGGACAC
TTGGTCGTGTCGACCATGCATGCCGCGGATGCCGTCGGTGCGGTGTACCGGCTGCATGAATTCGGTGTGCCACCCGGCGA
CTTGGCTGAAACGCTGCTTGCCGTTTCGGCGCAGCGCCTTGTCGAGCTATGCTGTCCGCTATGTGGCGACGATTGCCATC
CGGCGTGTCGCCGGCTTCAACGCAGACGGCGTGCCGCCGTCCATGAACTGCTTTACGGACCGGAGCTTATGAATGTCATC
CGTTCGCTGTCGGACAGTGATGGGCGACGGCCCCGCCGCCATATGACATTAGGGCGCCTCATCCGCAAGGGAATCGCGCT
TGGTTATTTGCCGACCCGCGCGCTTGAGCTTGCCGAAGGGGGAGAGCGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
50.432 |
95.592 |
0.482 |