Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LDO52_RS03370 Genome accession   NZ_CP084300
Coordinates   689788..690171 (+) Length   127 a.a.
NCBI ID   WP_005097851.1    Uniprot ID   N9MAE5
Organism   Acinetobacter pseudolwoffii strain XMC5X702     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 684788..695171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LDO52_RS03360 (LDO52_03360) - 687674..688801 (-) 1128 WP_225553759.1 efflux RND transporter periplasmic adaptor subunit -
  LDO52_RS03365 (LDO52_03365) - 688853..689500 (-) 648 WP_225553761.1 hypothetical protein -
  LDO52_RS03370 (LDO52_03370) pilG 689788..690171 (+) 384 WP_005097851.1 twitching motility response regulator PilG Regulator
  LDO52_RS03375 (LDO52_03375) - 690196..690564 (+) 369 WP_225553764.1 response regulator -
  LDO52_RS03380 (LDO52_03380) - 690570..691106 (+) 537 WP_005097846.1 chemotaxis protein CheW -
  LDO52_RS03385 (LDO52_03385) - 691153..693225 (+) 2073 WP_005097845.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14301.36 Da        Isoelectric Point: 4.7172

>NTDB_id=610511 LDO52_RS03370 WP_005097851.1 689788..690171(+) (pilG) [Acinetobacter pseudolwoffii strain XMC5X702]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGYEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=610511 LDO52_RS03370 WP_005097851.1 689788..690171(+) (pilG) [Acinetobacter pseudolwoffii strain XMC5X702]
ATGGACGATAAATTCCAAAATCTAAAAGTTATGGTTATTGATGACTCAAAGACCATTCGTCGTACCGCGGAAACTCTTCT
TCAGCGCGAAGGTTATGAAGTGATTACTGCCGTCGACGGATTTGAAGCTTTGTCAAAAATTGCCGAAGCAAATCCAGATA
TCGTGTTTGTAGACATCATGATGCCGCGTCTAGATGGCTATCAAACTTGCGCGTTAATTAAAAATTCTCAGAATTACCAG
AATATTCCTGTGATTATGCTATCAAGTAAAGATGGTTTATTTGATCAGGCCAAAGGTCGTGTTGTGGGTTCAGATGAATA
CCTGACCAAACCTTTTAGTAAAGATGAATTGCTGAACGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9MAE5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

44.444

92.126

0.409
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37