Detailed information NTG0061015

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RBAU_RS17305
• Genome accession: NC_022075
• Coordinates: 3538033..3539196 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis UCMB5033
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3533033..3544196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBAU_RS17275 (RBAU_3398)	-	3533297..3533716 (-)	420	WP_007407479.1	TIGR03826 family flagellar region protein	-
RBAU_RS17280 (RBAU_3399)	comFC	3533790..3534479 (-)	690	WP_197061611.1	phosphoribosyltransferase family protein	Machinery gene
RBAU_RS17285 (RBAU_3400)	-	3534485..3534769 (-)	285	WP_007407481.1	competence protein ComFB	-
RBAU_RS17290 (RBAU_3401)	comFA	3534827..3536212 (-)	1386	WP_007407482.1	DEAD/DEAH box helicase	Machinery gene
RBAU_RS17295 (RBAU_3402)	-	3536321..3537169 (-)	849	WP_007407483.1	DegV family protein	-
RBAU_RS17300 (RBAU_3403)	degU	3537267..3537956 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RBAU_RS17305 (RBAU_3404)	degS	3538033..3539196 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
RBAU_RS17310 (RBAU_3405)	-	3539419..3540066 (+)	648	WP_007407485.1	YigZ family protein	-
RBAU_RS17315 (RBAU_3406)	-	3540071..3541291 (+)	1221	WP_007407486.1	LCP family protein	-
RBAU_RS17320 (RBAU_3407)	-	3541390..3542466 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
RBAU_RS17325 (RBAU_3408)	-	3542599..3543795 (-)	1197	WP_007407487.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=61015 RBAU_RS17305 WP_007407484.1 3538033..3539196(-) (degS) [Bacillus velezensis UCMB5033]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=61015 RBAU_RS17305 WP_007407484.1 3538033..3539196(-) (degS) [Bacillus velezensis UCMB5033]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951