Detailed information NTG0608777

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: LCH18_RS15965
• Genome accession: NZ_CP083947
• Coordinates: 3293882..3295246 (+)
• Length: 454 a.a.
• NCBI ID: WP_252716331.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain CSUSB1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3288882..3300246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCH18_RS15945 (LCH18_15945)	thrC	3289086..3290225 (+)	1140	WP_004692833.1	threonine synthase	-
LCH18_RS15950 (LCH18_15950)	-	3290313..3291368 (-)	1056	WP_153041792.1	serine hydrolase	-
LCH18_RS15955 (LCH18_15955)	-	3291584..3292219 (+)	636	WP_004692836.1	response regulator	-
LCH18_RS15960 (LCH18_15960)	pilS	3292241..3293809 (+)	1569	WP_224467696.1	sensor histidine kinase	Regulator
LCH18_RS15965 (LCH18_15965)	pilR	3293882..3295246 (+)	1365	WP_252716331.1	sigma-54-dependent transcriptional regulator	Regulator
LCH18_RS15970 (LCH18_15970)	-	3295251..3296426 (-)	1176	WP_224467698.1	S41 family peptidase	-
LCH18_RS15975 (LCH18_15975)	gpmI	3296445..3297992 (-)	1548	WP_224467699.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
LCH18_RS15980 (LCH18_15980)	lptG	3298116..3299186 (-)	1071	WP_159153611.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51089.82 Da
• Isoelectric Point: 6.8692

>NTDB_id=608777 LCH18_RS15965 WP_252716331.1 3293882..3295246(+) (pilR) [Acinetobacter johnsonii strain CSUSB1]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGTVGNDQLSHMPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDPV

Nucleotide

• Length: 1365 bp

>NTDB_id=608777 LCH18_RS15965 WP_252716331.1 3293882..3295246(+) (pilR) [Acinetobacter johnsonii strain CSUSB1]
ATGCAAATGTCTTTAAGTCGGATGGGAATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAAC
GCATCAATACGATGCCTGTCTAACCGATCTGAATTTACCCGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAA
ATTATCCTAATTTGCCCGTTGCAGTGCTGACTGCTTACGGCAATATGGATATTGCGATTGCAGCACTTAAAGCCGGTGCT
TTTGATTTTGTCAGTAAACCAATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCA
GCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAACAGCTACGCATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACGGGTGAATCAGGCACTGGCAAAGAAGTGGTGGCGAATCTG
GTACATCGCCTGAGCAATCGTAATGAAGGGCCATTTATTGCCATCAACTGCGGTGCCATACCGACTGAACTGATGGAAAG
TGAATTGTTTGGACACCGTAAGGGTAGCTTTACAGGGGCGACCCAAGACAAACAAGGGCTGATTCTGTCTGCGCATGGCG
GCAGTTTATTTTTAGATGAAATTGCTGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGTCCAATTGGGAGTGACACCGAAATTGATGTCGATTTCCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACT
GGTGCAACAAGGCAAGTTCCGTCAGGATTTATACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCCCTACGTGAGC
GTGGCAATGACATTATTCTTTTGGCACAACATTTCATTCAAAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCACTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAATTACGCAATATGATGGAACGTGC
CATCACTTTAAGCGATGAAAGCAGTATCGACTTACCGCACTTGCAAACAGCCCCACTGCGACCCATTGCTCAGACCAACT
ATGCCAATGCCACCCAACAAGGTACTGTTGGCAATGATCAACTCAGTCATATGCCTTCGCGTAAATTACCCGAAGAGGGT
TTAGAGCTGTATCTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCACTGGAACCGAACACTAGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGACTAGATGGCGAAGACGATCCCG
TTTAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Response regulator receiver domain (Response_reg) (4-97)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.89	100	0.749
pilR	Pseudomonas aeruginosa PAK	48.78	99.339	0.485