Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   KE3_RS07430 Genome accession   NC_021900
Coordinates   1480563..1481567 (-) Length   334 a.a.
NCBI ID   WP_020917239.1    Uniprot ID   -
Organism   Streptococcus lutetiensis 033     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1475563..1486567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS07410 (KE3_1522) thrS 1475837..1477783 (-) 1947 WP_020917236.1 threonine--tRNA ligase -
  KE3_RS07420 (KE3_1523) - 1478135..1479469 (-) 1335 WP_020917237.1 glycosyltransferase family 4 protein -
  KE3_RS07425 (KE3_1524) - 1479471..1480469 (-) 999 WP_020917238.1 glycosyltransferase -
  KE3_RS07430 (KE3_1525) ccpA 1480563..1481567 (-) 1005 WP_020917239.1 catabolite control protein A Regulator
  KE3_RS07435 (KE3_1527) - 1481909..1482994 (+) 1086 WP_020917241.1 M24 family metallopeptidase -
  KE3_RS07440 (KE3_1528) - 1483179..1483472 (+) 294 WP_020917242.1 NUDIX domain-containing protein -
  KE3_RS07445 (KE3_1529) - 1483757..1483978 (+) 222 WP_181949887.1 hypothetical protein -
  KE3_RS07450 (KE3_1530) - 1484065..1484742 (+) 678 WP_020917244.1 NAD(P)H-dependent oxidoreductase -
  KE3_RS07455 (KE3_1531) - 1484781..1486126 (-) 1346 Protein_1442 dihydrolipoyl dehydrogenase family protein -
  KE3_RS10920 - 1486137..1486325 (-) 189 WP_228380480.1 hypothetical protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36575.66 Da        Isoelectric Point: 5.7584

>NTDB_id=60837 KE3_RS07430 WP_020917239.1 1480563..1481567(-) (ccpA) [Streptococcus lutetiensis 033]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVINTLLAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADAVDILAKNNKDIAFVSGPLIDDINGKVRLAGYKEGLEKNNLSFKEGLVFEAHYSYKDGYELAQRVMNSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEILTSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKGI
ILNHGLKLRGTTRQ

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=60837 KE3_RS07430 WP_020917239.1 1480563..1481567(-) (ccpA) [Streptococcus lutetiensis 033]
ATGAACACTGATGATACGATTACAATTTATGATGTTGCACGAGAAGCAGGTGTCTCAATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAATGTAAAGGAAAACACTCGTAAAAAAGTACTTGAAGTTATTGACCGTTTAGACTATCGTCCAAATG
CAGTTGCTCGTGGTTTGGCAAGTAAAAAAACTACGACAGTTGGTGTTGTTATTCCAAATATCGCTAATAGCTATTTCTCA
ATTTTAGCGAAAGGTATCGACGATATTGCTGCAATGTACAAATACAATATCGTTCTTGCGTCAAGTGATGAAGATGACGA
TAAAGAAGTTAATGTTATTAACACTTTGCTTGCAAAACAAGTGGATGGTATTATCTTCATGGGACACCATTTAACAGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTGGTTCTAGCAGGAACAGTTGATTTAGAACACCAACTTCCAAGT
GTTAATATTGATTACAAAGCTGCCGTGGCTGATGCTGTTGATATTTTGGCTAAAAATAACAAAGATATTGCCTTTGTTTC
AGGACCACTTATCGATGACATTAACGGTAAAGTTCGTCTTGCAGGATACAAAGAAGGACTTGAAAAGAACAACCTATCAT
TCAAAGAAGGACTTGTATTTGAAGCTCACTACAGCTACAAAGATGGTTATGAACTAGCTCAACGCGTGATGAATTCAGGT
GCTACAGCTGCTTATGTTGCTGAAGACGAACTAGCTGCAGGTCTTTTGAATGGATTGTTTGCCGCAGGTAAAAAAGTTCC
TGAAGACTTTGAAATTCTTACAAGTAATGATTCACCAATCACATCATACACTCGTCCAAACCTAAGCTCAATTAGCCAAC
CAGTTTATGACCTTGGTGCGGTAAGTATGCGTATGTTGACTAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGGAATT
ATTCTTAATCATGGTCTTAAATTGCGTGGTACTACACGTCAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.042

100

0.79
  ccpA Streptococcus pneumoniae D39

76.647

100

0.766
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.193

99.102

0.557

Multiple sequence alignment