Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   LAZ97_RS15915 Genome accession   NZ_CP083763
Coordinates   3191800..3191940 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain DMB06     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3186800..3196940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAZ97_RS15890 (LAZ97_15890) - 3187097..3187480 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  LAZ97_RS15895 (LAZ97_15895) comA 3187502..3188146 (-) 645 WP_129093769.1 response regulator transcription factor Regulator
  LAZ97_RS15900 (LAZ97_15900) comP 3188227..3190530 (-) 2304 WP_070082286.1 histidine kinase Regulator
  LAZ97_RS15910 (LAZ97_15910) comQ 3190683..3191615 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  LAZ97_RS15915 (LAZ97_15915) degQ 3191800..3191940 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  LAZ97_RS15920 (LAZ97_15920) - 3192405..3192746 (+) 342 WP_021495366.1 hypothetical protein -
  LAZ97_RS15925 (LAZ97_15925) - 3192753..3193976 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  LAZ97_RS15930 (LAZ97_15930) - 3194106..3195572 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  LAZ97_RS15935 (LAZ97_15935) - 3195590..3196141 (-) 552 WP_017419426.1 cysteine hydrolase family protein -
  LAZ97_RS15940 (LAZ97_15940) - 3196238..3196636 (-) 399 WP_003152031.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=607776 LAZ97_RS15915 WP_003152043.1 3191800..3191940(-) (degQ) [Bacillus velezensis strain DMB06]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=607776 LAZ97_RS15915 WP_003152043.1 3191800..3191940(-) (degQ) [Bacillus velezensis strain DMB06]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891