Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   LAZ97_RS15910 Genome accession   NZ_CP083763
Coordinates   3190683..3191615 (-) Length   310 a.a.
NCBI ID   WP_025650217.1    Uniprot ID   -
Organism   Bacillus velezensis strain DMB06     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3185683..3196615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAZ97_RS15875 (LAZ97_15875) - 3185939..3186415 (+) 477 WP_129093768.1 Na+/H+ antiporter subunit E -
  LAZ97_RS15880 (LAZ97_15880) - 3186415..3186699 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  LAZ97_RS15885 (LAZ97_15885) mnhG 3186683..3187057 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  LAZ97_RS15890 (LAZ97_15890) - 3187097..3187480 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  LAZ97_RS15895 (LAZ97_15895) comA 3187502..3188146 (-) 645 WP_129093769.1 response regulator transcription factor Regulator
  LAZ97_RS15900 (LAZ97_15900) comP 3188227..3190530 (-) 2304 WP_070082286.1 histidine kinase Regulator
  LAZ97_RS15910 (LAZ97_15910) comQ 3190683..3191615 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  LAZ97_RS15915 (LAZ97_15915) degQ 3191800..3191940 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  LAZ97_RS15920 (LAZ97_15920) - 3192405..3192746 (+) 342 WP_021495366.1 hypothetical protein -
  LAZ97_RS15925 (LAZ97_15925) - 3192753..3193976 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  LAZ97_RS15930 (LAZ97_15930) - 3194106..3195572 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  LAZ97_RS15935 (LAZ97_15935) - 3195590..3196141 (-) 552 WP_017419426.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 310 a.a.        Molecular weight: 35663.80 Da        Isoelectric Point: 5.4532

>NTDB_id=607775 LAZ97_RS15910 WP_025650217.1 3190683..3191615(-) (comQ) [Bacillus velezensis strain DMB06]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=607775 LAZ97_RS15910 WP_025650217.1 3190683..3191615(-) (comQ) [Bacillus velezensis strain DMB06]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

93.226

0.571