Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LA331_RS07080 Genome accession   NZ_CP083658
Coordinates   1427035..1427418 (-) Length   127 a.a.
NCBI ID   WP_004784987.1    Uniprot ID   N9NVI8
Organism   Acinetobacter variabilis strain FDAARGOS_1487     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1422035..1432418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LA331_RS07065 (LA331_07065) - 1423983..1426052 (-) 2070 WP_005236998.1 methyl-accepting chemotaxis protein -
  LA331_RS07070 (LA331_07070) - 1426099..1426635 (-) 537 WP_004784984.1 chemotaxis protein CheW -
  LA331_RS07075 (LA331_07075) - 1426641..1427009 (-) 369 WP_004784985.1 response regulator -
  LA331_RS07080 (LA331_07080) pilG 1427035..1427418 (-) 384 WP_004784987.1 twitching motility response regulator PilG Regulator
  LA331_RS07085 (LA331_07085) - 1427701..1428345 (+) 645 WP_005237001.1 hypothetical protein -
  LA331_RS07090 (LA331_07090) - 1428397..1429524 (+) 1128 WP_005237002.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14287.34 Da        Isoelectric Point: 4.7172

>NTDB_id=607174 LA331_RS07080 WP_004784987.1 1427035..1427418(-) (pilG) [Acinetobacter variabilis strain FDAARGOS_1487]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGYEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=607174 LA331_RS07080 WP_004784987.1 1427035..1427418(-) (pilG) [Acinetobacter variabilis strain FDAARGOS_1487]
ATGGACGATAAATTCCAAAATCTAAAAGTTATGGTCATTGATGACTCAAAGACCATTCGTCGTACAGCAGAAACTCTTCT
ACAGCGCGAAGGATATGAAGTCGTGACTGCGGTAGATGGTTTTGAAGCTTTGTCAAAAATCGCAGAAGCCAATCCAGATA
TCGTATTTGTAGACATCATGATGCCTCGTCTAGATGGTTATCAAACTTGTGCGTTGATTAAAAACTCTCAAAATTATCAG
AATATTCCTGTGATTATGCTTTCGAGTAAAGATGGCTTATTTGATCAGGCCAAAGGTCGTGTTGTTGGTTCGGATGAATA
CTTGACTAAACCTTTCAGTAAAGATGAATTGCTTAATGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9NVI8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

43.59

92.126

0.402
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37