Detailed information NTG0607172

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: LA331_RS06120
• Genome accession: NZ_CP083658
• Coordinates: 1240981..1243443 (-)
• Length: 820 a.a.
• NCBI ID: WP_005236709.1
• Uniprot ID: N9NW63
• Organism: Acinetobacter variabilis strain FDAARGOS_1487
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1236297..1244211	1240981..1243443	within	0

Gene organization within MGE regions

Location: 1236297..1244211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LA331_RS06095 (LA331_06095)	purM	1236297..1237367 (+)	1071	WP_005236701.1	phosphoribosylformylglycinamidine cyclo-ligase	-
LA331_RS06100 (LA331_06100)	purN	1237374..1238003 (+)	630	WP_005236703.1	phosphoribosylglycinamide formyltransferase	-
LA331_RS06105 (LA331_06105)	-	1238068..1238871 (-)	804	WP_005236704.1	alpha/beta fold hydrolase	-
LA331_RS06110 (LA331_06110)	sppA	1238868..1239890 (-)	1023	WP_005236706.1	signal peptide peptidase SppA	-
LA331_RS06115 (LA331_06115)	-	1240018..1240992 (+)	975	WP_005236707.1	lysophospholipid acyltransferase family protein	-
LA331_RS06120 (LA331_06120)	comA/comEC	1240981..1243443 (-)	2463	WP_005236709.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LA331_RS06125 (LA331_06125)	lolD	1243528..1244211 (-)	684	WP_005236711.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-

Sequence

Protein

• Length: 820 a.a.
• Molecular weight: 93605.17 Da
• Isoelectric Point: 8.5807

>NTDB_id=607172 LA331_RS06120 WP_005236709.1 1240981..1243443(-) (comA/comEC) [Acinetobacter variabilis strain FDAARGOS_1487]
MLQWLCLGCILGLACMGKNFLNIQLNPITVIFLAVLCYLCSSKCNAILKKPLHKGLLVGTCILIGIFLGHGYANQQLNKR
LLNVEHEVQQKDIIVYVKRLNKLGDQSIQQPLEVLNLDGRTVTWMGFLSVNPLNTSQLSANHENLNTLELGQYYRLQGQV
RPNHSYATPGAFDAEKWALQQNVMAGFRIKQIEQLDSATVSTLGHSQYIREQRALTQQFLLWVEQKRLQLREFIAKQPVQ
NKGLLLALLTGDESLLNPATEQQFRRMGMSHLLAISGPHVLIFALMVCSVLRLFIARSMPQLYLRWPRQYFLALPFLFCV
VLYCAFVGFEIPAIRTLLICMIGVLLMLLRQNLQALKLLILSAALLLFIDPFSILSAAFWLSYGACFVLLRIYQTIQQRP
SEQNQTAIQKLYFAAKVLVESQWKIFLALFPLMMLFFKQIAWITPFSNLVAIPWIGLLIVPADILAAMIFFIAEPVSSML
FQLNDLLLNILLGFLNLLDHWFKPQLIPVAMNLWMIGLCILSLLILCLPRGVLPKSWIAVAAVPICIPQFYHPPFQLSVL
DVGQGQAIFLRHEIHNMMIDMGGYYDEEKFSIGKQVIMPFLSVQGVSQLDQLILTHLDQDHSGAYHSIKDQLKIQNIYAN
EVTDTATASNFQLCYQGQQWQWQNDLQIRVIAPKLEQLNTANFNKNDLSCVVYLQLKNAWPYQSFLLMGDAGWQTEYQLL
KDYPDLKVDVLVLGHHGSQHSSAYQFLQHYRPKLAIASAGRFNRYGHPSQLTQQRLKELDIPLLTTAEHGSLHFSQQGTQ
IILETERSRWKWLQKQNLTD

Nucleotide

• Length: 2463 bp

>NTDB_id=607172 LA331_RS06120 WP_005236709.1 1240981..1243443(-) (comA/comEC) [Acinetobacter variabilis strain FDAARGOS_1487]
ATGTTGCAATGGCTGTGTCTGGGCTGCATTTTAGGCCTAGCCTGTATGGGAAAAAATTTCCTTAATATCCAGTTAAATCC
AATAACAGTCATATTTCTCGCAGTACTTTGCTATCTGTGTAGTTCTAAATGTAATGCGATTCTGAAAAAGCCCTTACATA
AAGGATTGCTGGTAGGCACCTGTATTCTAATCGGGATATTTCTGGGACATGGTTATGCCAATCAACAGCTCAACAAACGG
CTATTAAATGTCGAGCATGAAGTACAGCAAAAAGACATTATCGTTTATGTTAAACGCTTGAATAAACTCGGTGATCAATC
TATACAGCAGCCTTTGGAAGTATTAAACCTCGATGGACGCACCGTGACCTGGATGGGTTTTCTATCTGTAAATCCTCTCA
ATACTTCACAACTATCAGCGAATCATGAAAATTTAAATACGCTTGAACTGGGTCAGTATTACCGGCTGCAAGGTCAGGTA
CGTCCTAATCACAGTTATGCAACGCCCGGTGCTTTTGATGCTGAAAAATGGGCACTGCAACAGAATGTGATGGCCGGTTT
CCGGATCAAGCAGATAGAGCAACTTGATTCAGCTACTGTTTCTACACTGGGGCATAGTCAGTATATTCGAGAGCAAAGAG
CTTTAACTCAGCAATTTCTACTTTGGGTAGAACAAAAACGGCTGCAATTAAGAGAGTTCATAGCAAAGCAACCTGTACAA
AATAAAGGTCTGCTTCTGGCTTTGCTCACCGGAGATGAAAGCCTTTTAAATCCTGCAACTGAGCAGCAATTTCGACGTAT
GGGGATGAGTCACTTACTCGCGATTTCTGGCCCACATGTGCTGATCTTTGCCCTGATGGTCTGCTCCGTACTTCGATTAT
TCATTGCTCGAAGTATGCCTCAGCTTTATCTAAGATGGCCACGCCAGTATTTTCTGGCTTTGCCTTTTCTGTTTTGTGTG
GTGCTGTACTGTGCCTTTGTGGGTTTTGAAATCCCGGCAATCCGCACTCTGCTGATCTGTATGATTGGCGTTCTTCTCAT
GCTGCTCCGACAAAATCTGCAGGCTTTAAAACTTCTGATTCTGAGCGCTGCCTTACTGTTATTCATTGATCCCTTTAGTA
TCTTGTCCGCGGCTTTCTGGCTGTCCTATGGGGCTTGTTTTGTATTGCTCAGAATTTATCAGACCATTCAACAGCGACCA
TCCGAGCAAAATCAGACAGCAATACAAAAACTGTATTTTGCAGCTAAAGTGCTGGTGGAATCACAGTGGAAAATCTTTCT
CGCTTTATTTCCTTTAATGATGCTGTTTTTTAAGCAGATTGCTTGGATCACGCCGTTCAGCAATCTGGTCGCAATCCCTT
GGATCGGTCTGCTGATTGTACCGGCCGATATTCTGGCAGCGATGATATTTTTTATCGCTGAACCGGTGTCAAGCATGCTA
TTTCAGCTTAATGATCTGTTGCTGAATATCCTATTGGGCTTCTTAAATCTGCTGGATCACTGGTTTAAACCGCAGTTAAT
ACCAGTTGCGATGAATCTCTGGATGATTGGTCTATGCATCCTGTCTTTGCTGATTTTATGCTTACCACGTGGAGTATTAC
CAAAATCCTGGATAGCTGTCGCGGCGGTACCAATTTGTATTCCTCAATTCTATCATCCACCATTTCAGCTTTCAGTGCTG
GACGTCGGTCAAGGACAGGCGATATTCCTTCGTCATGAAATCCATAACATGATGATCGATATGGGCGGTTATTATGATGA
GGAAAAATTTAGTATTGGAAAGCAGGTAATCATGCCATTTCTGTCGGTACAGGGTGTTTCTCAACTGGATCAACTAATTT
TAACGCATCTGGATCAGGACCATAGTGGTGCTTATCACAGCATTAAAGACCAGCTCAAGATTCAGAATATCTATGCCAAT
GAAGTGACCGACACTGCAACCGCTTCAAACTTTCAATTATGTTATCAGGGACAGCAGTGGCAATGGCAGAATGATCTGCA
GATTAGGGTCATTGCACCAAAACTAGAACAATTAAATACCGCTAATTTCAATAAAAATGACCTGTCTTGTGTGGTCTATT
TGCAGCTCAAAAATGCCTGGCCTTATCAAAGTTTTCTGCTAATGGGAGATGCAGGTTGGCAGACTGAATATCAGTTACTC
AAAGACTATCCAGATTTAAAAGTGGATGTTTTGGTATTAGGCCATCATGGCAGTCAGCACAGTTCAGCTTATCAATTCTT
GCAGCATTATCGTCCTAAACTGGCGATTGCGTCTGCAGGAAGATTTAACCGTTATGGTCATCCAAGTCAGTTGACTCAAC
AGCGTCTCAAAGAATTGGATATTCCTTTATTGACTACAGCCGAGCATGGTAGTTTGCATTTCTCTCAGCAAGGAACTCAA
ATCATTCTAGAAACTGAAAGAAGTCGCTGGAAATGGTTACAAAAACAAAATCTAACTGACTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (30-195)

• Competence protein (Competence) (248-530)

3D structure

• AlphaFold DB: N9NW63

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baylyi ADP1	47.99	100	0.48
comA/comEC	Acinetobacter baumannii D1279779	47.515	100	0.478
comA/comEC	Acinetobacter baumannii strain A118	46.788	100	0.471