Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   LA346_RS04850 Genome accession   NZ_CP083627
Coordinates   908432..909190 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain FDAARGOS_1508     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 903432..914190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LA346_RS04820 (LA346_04820) comE 904029..904781 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  LA346_RS04825 (LA346_04825) comD/comD1 904778..906103 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  LA346_RS04830 (LA346_04830) comC/comC1 906124..906249 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  LA346_RS04840 (LA346_04840) rlmH 906531..907010 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LA346_RS04845 (LA346_04845) htrA 907193..908374 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  LA346_RS04850 (LA346_04850) spo0J 908432..909190 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  LA346_RS04855 (LA346_04855) dnaA 909403..910764 (+) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  LA346_RS04860 (LA346_04860) dnaN 910923..912059 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  LA346_RS04865 (LA346_04865) - 912124..912318 (+) 195 WP_000285193.1 DUF951 domain-containing protein -
  LA346_RS04870 (LA346_04870) - 912747..912905 (-) 159 WP_000568693.1 hypothetical protein -
  LA346_RS04875 (LA346_04875) - 912959..913351 (-) 393 WP_000417889.1 hypothetical protein -
  LA346_RS04880 (LA346_04880) - 913507..913917 (-) 411 WP_000187312.1 DUF1492 domain-containing protein -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=606837 LA346_RS04850 WP_000410378.1 908432..909190(+) (spo0J) [Streptococcus pneumoniae strain FDAARGOS_1508]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=606837 LA346_RS04850 WP_000410378.1 908432..909190(+) (spo0J) [Streptococcus pneumoniae strain FDAARGOS_1508]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508