Detailed information NTG0606501

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD57_RS22760
• Genome accession: NZ_CP100895
• Coordinates: 4583702..4584727 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET846
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4578702..4589727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD57_RS22740 (NMD57_22580)	metJ	4579763..4580080 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD57_RS22745 (NMD57_22585)	yiiX	4580264..4580872 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NMD57_RS22750 (NMD57_22590)	rpmE	4580933..4581145 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD57_RS22755 (NMD57_22595)	priA	4581348..4583546 (+)	2199	WP_370560025.1	primosomal protein N'	Machinery gene
NMD57_RS22760 (NMD57_22600)	cytR	4583702..4584727 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD57_RS22765 (NMD57_22605)	ftsN	4584819..4585778 (+)	960	WP_000068828.1	cell division protein FtsN	-
NMD57_RS22770 (NMD57_22610)	hslV	4585871..4586401 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD57_RS22775 (NMD57_22615)	hslU	4586411..4587742 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMD57_RS22780 (NMD57_22620)	menA	4587809..4588735 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD57_RS22785 (NMD57_22625)	rraA	4588828..4589313 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD57_RS22790 (NMD57_22630)	zapB	4589398..4589643 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=606501 NMD57_RS22760 WP_000644904.1 4583702..4584727(+) (cytR) [Escherichia coli strain ET846]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=606501 NMD57_RS22760 WP_000644904.1 4583702..4584727(+) (cytR) [Escherichia coli strain ET846]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAAGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628