Detailed information NTG0603647

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: K8U54_RS01855
• Genome accession: NZ_CP082928
• Coordinates: 435544..437766 (-)
• Length: 740 a.a.
• NCBI ID: WP_249908624.1
• Uniprot ID: -
• Organism: Pseudomonas fulva strain ZJU1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 430544..442766

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8U54_RS01820 (K8U54_01815)	murB	430910..431929 (-)	1020	WP_249908618.1	UDP-N-acetylmuramate dehydrogenase	-
K8U54_RS01825 (K8U54_01820)	-	431926..432390 (-)	465	WP_249908619.1	low molecular weight protein-tyrosine-phosphatase	-
K8U54_RS01830 (K8U54_01825)	kdsB	432390..433154 (-)	765	WP_249908620.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
K8U54_RS01835 (K8U54_01830)	-	433156..433341 (-)	186	WP_013791977.1	Trm112 family protein	-
K8U54_RS01840 (K8U54_01835)	lpxK	433383..434390 (-)	1008	WP_249908621.1	tetraacyldisaccharide 4'-kinase	-
K8U54_RS01845 (K8U54_01840)	-	434390..434818 (-)	429	WP_249908622.1	biopolymer transporter ExbD	-
K8U54_RS01850 (K8U54_01845)	exbB	434815..435471 (-)	657	WP_249908623.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
K8U54_RS01855 (K8U54_01850)	comA	435544..437766 (-)	2223	WP_249908624.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
K8U54_RS01860 (K8U54_01855)	-	437888..439132 (-)	1245	WP_249908625.1	lipoprotein-releasing ABC transporter permease subunit	-
K8U54_RS01865 (K8U54_01860)	lolD	439132..439836 (-)	705	WP_249908626.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
K8U54_RS01870 (K8U54_01865)	-	439829..441079 (-)	1251	WP_249908627.1	lipoprotein-releasing ABC transporter permease subunit	-
K8U54_RS01875 (K8U54_01870)	-	441175..441747 (+)	573	WP_249908628.1	PilZ domain-containing protein	-
K8U54_RS01880 (K8U54_01875)	-	441744..442040 (+)	297	WP_249908629.1	phosphodiesterase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 81129.23 Da
• Isoelectric Point: 8.8625

>NTDB_id=603647 K8U54_RS01855 WP_249908624.1 435544..437766(-) (comA) [Pseudomonas fulva strain ZJU1]
MRSALLALAAGLLVLRFLPQLPPVSLLLASALLGLILLPFRSYRIGLLLLGFSWACLSAQWALDDRLDPALDGRTLWLEG
RVVDLPDVRDGVVRFHLAEPRSRRAELPRLLRLSWYGGPEIRAGETWRLAVNLKRPHGLVNPQSFDYEAWLLAQRIGGVG
TIKSGQRLSEAGGSSAWRDRLRQHMLAEDPHGRAGGLAALVLGDSSGLSVADWRVLQDTGTVHLLVISGQHVTLVAGMFY
GLVFWLARLGWWPRALPWLPTACLLGFASALGYSLLAGFEVPVQRACAMIGLVLLWRWRFRHLGITLPLLMALVAVLLLE
PLAVLQPGFWLSFGAVGLLILIFAARLGAWAWWRTLGRAQWAMTLGLLPMLMALGLPISASSPLANLIAVPWVGFAVVPL
ALLGTLLLPVPWLGEGLLWLAGFSLEWLFRLLGLMAEWLPAWLPSHLPLWGWLLVALGALFILLPGGVPLRSLGLILLLP
LLFTPVERPAEQRAEVWMLDVGQGLSMLVLTRHHALLYDAGPSFGDFDLGERVVLPSLRALDVRALDMLLISHSDNDHSG
GAEAVARGMPVKRVVSGEAPALPAGLGAEACGQATWAWDGVQFSTWRWAEAADSNQSSCVLMIEAAGERILLTGDIDTRA
ERALIDSGRELQARWLVAPHHGSRSSSSWALLKAVQPQAVLYSRGKHNAYGHPHPMVVSRYDAFEARAYDSVETGALRID
LGTFGEPRVLREIPRFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=603647 K8U54_RS01855 WP_249908624.1 435544..437766(-) (comA) [Pseudomonas fulva strain ZJU1]
TTGCGCAGCGCATTGTTGGCATTGGCCGCCGGCCTGTTGGTGCTGCGCTTTCTACCCCAGCTGCCACCGGTCTCGCTGTT
GCTGGCGTCCGCGCTGTTGGGGCTGATCCTGCTGCCGTTTCGCAGTTACCGGATCGGCCTGTTGCTGCTCGGCTTCAGCT
GGGCCTGCCTGTCGGCCCAATGGGCGCTGGATGATCGCCTGGACCCGGCACTGGACGGTCGCACGCTATGGCTGGAGGGC
AGGGTGGTGGACCTGCCGGATGTCCGTGACGGCGTGGTGCGCTTTCACCTGGCCGAGCCTCGGTCGCGGCGCGCCGAGCT
GCCGCGACTGCTGCGTCTGTCCTGGTATGGCGGGCCGGAGATCCGTGCTGGCGAAACCTGGCGACTGGCGGTCAACCTCA
AGCGGCCCCATGGGCTGGTCAACCCGCAATCCTTCGATTACGAGGCCTGGCTGCTGGCCCAGCGTATCGGTGGCGTGGGC
ACCATCAAGTCCGGCCAGCGCCTGAGCGAAGCCGGCGGCAGTTCGGCGTGGCGCGACCGCTTGCGCCAGCACATGCTCGC
CGAGGATCCCCATGGCCGTGCCGGCGGGCTGGCCGCCCTGGTGCTGGGCGACAGCTCCGGCCTGTCGGTCGCCGACTGGC
GGGTGCTGCAGGACACCGGCACGGTGCATCTGCTGGTGATCTCCGGCCAGCACGTGACGCTGGTAGCCGGCATGTTCTAC
GGCCTGGTGTTCTGGCTGGCCCGCCTGGGTTGGTGGCCACGCGCGCTGCCCTGGCTGCCCACGGCCTGCCTGCTGGGCTT
CGCCTCGGCGCTGGGCTACAGCCTGCTGGCCGGCTTCGAGGTGCCGGTGCAGCGGGCCTGCGCGATGATCGGCCTGGTGC
TGCTGTGGCGCTGGCGCTTTCGTCACCTGGGTATCACCTTGCCGCTGCTGATGGCACTGGTCGCGGTGCTGCTCCTGGAG
CCCCTGGCGGTGTTGCAGCCGGGTTTCTGGCTGTCGTTCGGCGCGGTGGGCCTGCTGATTCTGATTTTCGCCGCGCGCCT
GGGCGCCTGGGCCTGGTGGCGCACCTTGGGGCGCGCGCAGTGGGCGATGACCCTGGGCCTGCTGCCGATGCTGATGGCCC
TCGGCCTGCCGATCAGTGCCAGCAGCCCGCTGGCCAATCTGATCGCCGTGCCCTGGGTCGGTTTCGCCGTGGTACCGCTG
GCGCTGCTCGGCACCTTGCTGCTGCCGGTGCCCTGGCTTGGCGAGGGGCTACTGTGGCTGGCCGGCTTCTCCCTGGAGTG
GCTGTTCCGCCTGCTCGGCTTGATGGCCGAGTGGCTGCCGGCCTGGTTGCCCAGCCACCTGCCGTTGTGGGGCTGGCTGC
TGGTGGCGCTGGGCGCGCTGTTCATTCTATTGCCGGGCGGTGTGCCGTTGCGCAGCCTGGGACTGATCCTGCTGCTGCCG
TTGCTGTTCACGCCGGTAGAGCGGCCTGCCGAGCAGCGCGCCGAGGTATGGATGTTGGATGTCGGCCAGGGGCTGTCGAT
GCTGGTGCTGACCCGCCATCACGCGCTGCTGTATGACGCCGGCCCCAGCTTCGGCGATTTCGACCTGGGCGAGCGGGTGG
TGCTGCCCTCGTTGCGGGCACTGGATGTGCGCGCACTGGACATGCTGCTGATCAGCCATTCGGACAATGACCACTCCGGT
GGTGCCGAGGCGGTCGCGCGGGGCATGCCGGTGAAACGCGTGGTCAGTGGCGAGGCACCCGCGCTACCCGCCGGCCTCGG
CGCAGAGGCGTGCGGGCAAGCGACCTGGGCATGGGATGGCGTGCAGTTCAGCACCTGGCGCTGGGCCGAGGCGGCGGACA
GCAACCAGTCTTCCTGCGTGTTGATGATCGAGGCGGCCGGCGAGCGCATCCTGCTGACCGGGGATATCGACACGCGGGCC
GAGCGCGCGCTGATCGACAGCGGTCGCGAGCTGCAGGCCCGCTGGCTGGTGGCGCCGCACCACGGCAGCCGCAGTTCGTC
GTCCTGGGCCTTGCTCAAGGCGGTGCAGCCCCAGGCGGTGCTGTATTCGCGGGGCAAGCACAATGCCTATGGGCATCCGC
ATCCGATGGTGGTCTCCCGGTATGACGCCTTCGAGGCCCGGGCCTACGACAGCGTCGAGACCGGCGCACTGCGTATCGAC
CTCGGCACCTTTGGCGAGCCACGGGTACTGCGTGAAATACCGCGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-464)

• Domain of unknown function (DUF4131) (DUF4131) (24-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	64.306	97.297	0.626
comA	Ralstonia pseudosolanacearum GMI1000	35.638	100	0.404