Detailed information NTG0602172

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DVS74_RS09665
• Genome accession: NZ_CP099516
• Coordinates: 2088404..2089549 (+)
• Length: 381 a.a.
• NCBI ID: WP_004086451.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain ESVL
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2083404..2094549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DVS74_RS09645 (DVS74_009615)	rsmB	2084193..2085482 (-)	1290	WP_004086443.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
DVS74_RS09650 (DVS74_009620)	fmt	2085479..2086402 (-)	924	WP_004086445.1	methionyl-tRNA formyltransferase	-
DVS74_RS09655 (DVS74_009625)	def	2086508..2087020 (-)	513	WP_004086447.1	peptide deformylase	-
DVS74_RS09660 (DVS74_009630)	-	2087159..2088313 (+)	1155	WP_004086450.1	LysM peptidoglycan-binding domain-containing protein	-
DVS74_RS09665 (DVS74_009635)	dprA	2088404..2089549 (+)	1146	WP_004086451.1	DNA-processing protein DprA	Machinery gene
DVS74_RS09670 (DVS74_009640)	-	2089595..2090068 (+)	474	WP_004089636.1	DUF494 family protein	-
DVS74_RS09675 (DVS74_009645)	-	2091040..2093487 (+)	2448	WP_004086454.1	DNA topoisomerase I	-
DVS74_RS09680 (DVS74_009650)	-	2093601..2094164 (+)	564	WP_021358455.1	L-threonylcarbamoyladenylate synthase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40325.16 Da
• Isoelectric Point: 8.7008

>NTDB_id=602172 DVS74_RS09665 WP_004086451.1 2088404..2089549(+) (dprA) [Xylella fastidiosa subsp. multiplex strain ESVL]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIGRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=602172 DVS74_RS09665 WP_004086451.1 2088404..2089549(+) (dprA) [Xylella fastidiosa subsp. multiplex strain ESVL]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCC
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCGCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCTGTATTCGCAGTGCCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCCAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTGAT
TGGCCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362