Detailed information NTG0602087

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: JSY00_RS00740
• Genome accession: NZ_CP082778
• Coordinates: 120777..121211 (+)
• Length: 144 a.a.
• NCBI ID: WP_024395445.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID32098
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 115777..126211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JSY00_RS00710 (JSY00_00710)	-	116919..117869 (-)	951	WP_014637311.1	S66 peptidase family protein	-
JSY00_RS00715 (JSY00_00715)	comYA	117955..118905 (+)	951	WP_105140681.1	competence type IV pilus ATPase ComGA	Machinery gene
JSY00_RS00720 (JSY00_00720)	comYB	118817..119854 (+)	1038	WP_238492613.1	competence type IV pilus assembly protein ComGB	Machinery gene
JSY00_RS00725 (JSY00_00725)	comYC	119856..120137 (+)	282	WP_024395447.1	competence type IV pilus major pilin ComGC	Machinery gene
JSY00_RS00730 (JSY00_00730)	comGD	120118..120525 (+)	408	WP_024395446.1	competence type IV pilus minor pilin ComGD	-
JSY00_RS00735 (JSY00_00735)	comYE	120497..120790 (+)	294	WP_002936548.1	competence type IV pilus minor pilin ComGE	Machinery gene
JSY00_RS00740 (JSY00_00740)	comGF/cglF	120777..121211 (+)	435	WP_024395445.1	competence type IV pilus minor pilin ComGF	Machinery gene
JSY00_RS00745 (JSY00_00745)	comGG	121189..121599 (+)	411	WP_024395444.1	competence type IV pilus minor pilin ComGG	-
JSY00_RS00750 (JSY00_00750)	comYH	121656..122609 (+)	954	WP_044776365.1	class I SAM-dependent methyltransferase	Machinery gene
JSY00_RS00755 (JSY00_00755)	-	122659..123846 (+)	1188	WP_014637319.1	acetate kinase	-
JSY00_RS00760 (JSY00_00760)	-	124107..124658 (+)	552	WP_014637320.1	folate family ECF transporter S component	-
JSY00_RS00765 (JSY00_00765)	-	124714..125970 (+)	1257	WP_024401511.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16433.77 Da
• Isoelectric Point: 6.9832

>NTDB_id=602087 JSY00_RS00740 WP_024395445.1 120777..121211(+) (comGF/cglF) [Streptococcus suis strain ID32098]
MLKSKIPAFTLLECLVALIILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=602087 JSY00_RS00740 WP_024395445.1 120777..121211(+) (comGF/cglF) [Streptococcus suis strain ID32098]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCTTTAATCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTACCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae Rx1	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae D39	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae R6	53.901	97.917	0.528
comGF/cglF	Streptococcus mitis NCTC 12261	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	50	100	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	51.493	93.056	0.479
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458