Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   NEH83_RS15585 Genome accession   NZ_CP098783
Coordinates   3546310..3547434 (+) Length   374 a.a.
NCBI ID   WP_006125491.1    Uniprot ID   A0ABT7DGV6
Organism   Streptomyces sp. JUS-F4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3541310..3552434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NEH83_RS15570 (NEH83_15580) - 3541729..3542589 (+) 861 WP_302213458.1 hypothetical protein -
  NEH83_RS15575 (NEH83_15585) - 3542665..3544591 (-) 1927 Protein_3078 hypothetical protein -
  NEH83_RS15580 (NEH83_15590) radA/sms 3544808..3546229 (+) 1422 WP_030087855.1 DNA repair protein RadA Machinery gene
  NEH83_RS15585 (NEH83_15595) disA 3546310..3547434 (+) 1125 WP_006125491.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  NEH83_RS15590 (NEH83_15600) - 3547848..3548672 (-) 825 WP_302213459.1 hypothetical protein -
  NEH83_RS15595 (NEH83_15605) - 3548891..3549805 (+) 915 WP_302213460.1 A/G-specific adenine glycosylase -
  NEH83_RS15600 (NEH83_15610) - 3549967..3550638 (+) 672 WP_030087862.1 SigE family RNA polymerase sigma factor -
  NEH83_RS15605 (NEH83_15615) - 3550767..3551450 (+) 684 WP_032791092.1 hypothetical protein -
  NEH83_RS15610 (NEH83_15620) cseB 3551531..3552244 (+) 714 WP_030087866.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40412.35 Da        Isoelectric Point: 4.9406

>NTDB_id=601063 NEH83_RS15585 WP_006125491.1 3546310..3547434(+) (disA) [Streptomyces sp. JUS-F4]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=601063 NEH83_RS15585 WP_006125491.1 3546310..3547434(+) (disA) [Streptomyces sp. JUS-F4]
GTGGCAGCCAACGACCGGGCGACGACGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAATACCGGTGGCCTGATCGTGC
TGGGCATGGACAGAACCGTCGAGTCGATGTGTACCGGCGGATTCGTGCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTGGACAAGGACATGACCAAGATCCTGCGGGCCGGGGTGCAGCTGGTCCC
GGACGCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGGGCCAACCAGGCGCTCGCGACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGGCTCCTCTCGCTCCAGCTGGACGAGCTGATCGCC
GGGGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGACTACGTCCCCGAACCGACGGCGAAACGGTCGCGCACGGTGGCCGA
GGCGCTGACCGAGCTGGACTCCCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCGCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGTGGCCTCCAGAAGCTGCTGGCGGCCAGCGTGGACGATCTCCAGACGGTGGA
CGGGGTGGGCGAGGCCCGGGCGCGGAGTGTGCGCGAGGGGCTGTCGCGGTTGGCGGAGTCGTCGATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436