Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BAJP3144_RS15910 Genome accession   NZ_CP082283
Coordinates   3206184..3208490 (-) Length   768 a.a.
NCBI ID   WP_222893417.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain JP3144     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3201184..3213490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAJP3144_RS15870 (BAJP3144_15870) - 3201644..3202075 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  BAJP3144_RS15875 (BAJP3144_15875) - 3202075..3202416 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  BAJP3144_RS15880 (BAJP3144_15880) - 3202409..3203890 (+) 1482 WP_021495363.1 Na+/H+ antiporter subunit D -
  BAJP3144_RS15885 (BAJP3144_15885) - 3203896..3204372 (+) 477 WP_154817911.1 Na+/H+ antiporter subunit E -
  BAJP3144_RS15890 (BAJP3144_15890) - 3204372..3204656 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  BAJP3144_RS15895 (BAJP3144_15895) mnhG 3204640..3205014 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  BAJP3144_RS15900 (BAJP3144_15900) - 3205054..3205437 (-) 384 WP_017419422.1 hotdog fold thioesterase -
  BAJP3144_RS15905 (BAJP3144_15905) comA 3205459..3206103 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  BAJP3144_RS15910 (BAJP3144_15910) comP 3206184..3208490 (-) 2307 WP_222893417.1 sensor histidine kinase Regulator
  BAJP3144_RS15915 (BAJP3144_15915) comX 3208509..3208685 (-) 177 WP_017419424.1 competence pheromone ComX -
  BAJP3144_RS15920 (BAJP3144_15920) - 3208700..3209575 (-) 876 WP_110124799.1 polyprenyl synthetase family protein -
  BAJP3144_RS15925 (BAJP3144_15925) degQ 3209727..3209867 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  BAJP3144_RS15930 (BAJP3144_15930) - 3210332..3210673 (+) 342 WP_021495366.1 hypothetical protein -
  BAJP3144_RS15935 (BAJP3144_15935) - 3210680..3211903 (-) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89421.62 Da        Isoelectric Point: 8.4103

>NTDB_id=601056 BAJP3144_RS15910 WP_222893417.1 3206184..3208490(-) (comP) [Bacillus amyloliquefaciens strain JP3144]
MKKFIRNFSIVLLFVSLFYVVHIIYFTQNGVLVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRDNHKIDLHNTEFISLNSSYSFFIYIIPCILFALSLLCIFYIYKVNRVKDTYSAYILIIFLLFTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYYHFLYQYFKELKIKFSSGYVVSALYILPVINIIIEVFQNHFAFQLVTNIN
LGTFFLEMMVVYTVIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGRYIYSAIVTSPFIIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIVPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKII
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSKANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=601056 BAJP3144_RS15910 WP_222893417.1 3206184..3208490(-) (comP) [Bacillus amyloliquefaciens strain JP3144]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGTTCATATTATATATTTTAC
TCAAAACGGAGTTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATTATAAGGGATAACCATAAAATAGACCTACATAATACGGAATT
TATTTCCTTGAACAGCTCTTATAGCTTTTTTATTTATATTATCCCGTGCATATTGTTTGCTTTAAGTTTGTTGTGTATTT
TTTACATTTATAAAGTTAATAGAGTAAAAGATACTTATTCAGCCTATATTTTAATTATCTTTTTATTATTTACATCTATT
GCTTATTTAAGCGCAGGTGGAGTAACTAGAGGGTATGAAATAAACAGATATATTAACCTTTTTACGTTTTTGAATGTACC
TGTACTATACTATCATTTTCTTTATCAATATTTTAAAGAATTAAAAATAAAGTTTTCATCTGGTTATGTTGTGTCTGCTT
TATATATTTTGCCGGTTATTAATATAATAATTGAGGTATTTCAAAACCATTTTGCTTTTCAACTTGTTACGAATATTAAT
TTAGGAACATTTTTTTTGGAAATGATGGTTGTTTACACGGTTATTATTTTTTATGGACTAGTCTATAGAAAAAAGGATCA
CTTTTATTTGTTGAAAGTGTTACTTATATCTAACACCATAGCTTTTTTCCCTTTTACAGTTTTTTATATTATACCTGAGG
TGTTGTTCGGACGGTATATTTATTCTGCTATAGTGACGTCACCATTTATAATTATTATTCCGTTAGCGTTAGTCTACCAA
TTCGTGGTCAATAAAATCTATGATATAGATTTTTTGTTAGGCAGAATCAGGTACTATGGTTTCCTTTCCATTGTTCCGAC
TATTGGAGTTGTTTGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGCAAGATTATT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCAAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCAAAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(568-637)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.625

100

0.589