Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   K6I41_RS03265 Genome accession   NZ_CP082274
Coordinates   669305..669688 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter sp. AS23     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 664305..674688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6I41_RS03255 (K6I41_03245) - 667206..668315 (-) 1110 WP_250375746.1 efflux RND transporter periplasmic adaptor subunit -
  K6I41_RS03260 (K6I41_03250) - 668384..669019 (-) 636 WP_013196908.1 hypothetical protein -
  K6I41_RS03265 (K6I41_03255) pilG 669305..669688 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  K6I41_RS03270 (K6I41_03260) - 669712..670074 (+) 363 WP_004789266.1 response regulator -
  K6I41_RS03275 (K6I41_03265) - 670134..670670 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  K6I41_RS03280 (K6I41_03270) - 670715..672796 (+) 2082 WP_107881234.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=600755 K6I41_RS03265 WP_000389061.1 669305..669688(+) (pilG) [Acinetobacter sp. AS23]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=600755 K6I41_RS03265 WP_000389061.1 669305..669688(+) (pilG) [Acinetobacter sp. AS23]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTAATTGATGACTCAAAAACCATTCGCCGAACAGCCGAAACTTTATT
ACAGCGAGAAGGCTGTGAAGTAATTACTGCGGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAGGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGCGCTTTGATTAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGACGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37