Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   K6973_RS03160 Genome accession   NZ_CP082206
Coordinates   587446..588447 (+) Length   333 a.a.
NCBI ID   WP_003049927.1    Uniprot ID   A0A9X5LWR8
Organism   Streptococcus dysgalactiae strain DY107     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 582446..593447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS03135 (K6973_03135) - 582508..583434 (-) 927 WP_003053920.1 glycosyltransferase family 2 protein -
  K6973_RS03140 (K6973_03140) - 583571..584743 (-) 1173 WP_222819565.1 DNA/RNA non-specific endonuclease -
  K6973_RS03145 (K6973_03145) - 585090..585467 (-) 378 WP_222819566.1 VOC family protein -
  K6973_RS03150 (K6973_03150) - 585478..586143 (-) 666 WP_222819567.1 NAD(P)H-dependent oxidoreductase -
  K6973_RS03155 (K6973_03155) - 586187..587272 (-) 1086 WP_222819568.1 Xaa-Pro peptidase family protein -
  K6973_RS03160 (K6973_03160) ccpA 587446..588447 (+) 1002 WP_003049927.1 catabolite control protein A Regulator
  K6973_RS03165 (K6973_03165) - 588601..590064 (+) 1464 WP_222819569.1 alpha-amylase -
  K6973_RS03170 (K6973_03170) - 590141..591139 (+) 999 WP_222819570.1 glycosyltransferase -
  K6973_RS03175 (K6973_03175) - 591141..592475 (+) 1335 WP_218655172.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36683.74 Da        Isoelectric Point: 5.7248

>NTDB_id=600096 K6973_RS03160 WP_003049927.1 587446..588447(+) (ccpA) [Streptococcus dysgalactiae strain DY107]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVSNVVDILAENHQSIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=600096 K6973_RS03160 WP_003049927.1 587446..588447(+) (ccpA) [Streptococcus dysgalactiae strain DY107]
ATGAATACAGATGATACCATCACGATTTATGACGTTGCCCGTGAAGCTGGTGTTTCTATGGCAACTGTTAGTCGTGTTGT
TAATGGCAACAAAAACGTTAAGGAAAACACGCGTAAGAAAGTTTTAGAAGTCATTGACCGCCTAGATTATCGTCCAAATG
CTGTCGCACGTGGTCTCGCCAGCAAAAAAACAACAACCGTCGGGGTTGTGATTCCGAATATTGCAAACAGTTATTTTTCT
ATTTTAGCCAAAGGTATTGATGATATCGCCGCTATGTATAAATATAATATTGTACTTGCCTCTAGTGATGAGGATGATGA
CAAGGAGGTTAACGTTGTCAATACCCTCTTTGCTAAGCAAGTTGACGGTATTATCTTTATGGGGCACCATTTGACTGAAA
AAATCCGTGCGGAATTTTCACGCTCACGCACCCCGATTGTTTTAGCAGGGACAGTTGACCTTGATCATCAATTACCAAGT
GTTAATATTGACTATAAGGCAGCTGTGTCTAATGTGGTTGATATTTTGGCAGAAAACCATCAGAGCATTGCCTTTGTGTC
AGGACCACTTATTGATGACATCAATGGTAAAGTACGTTTGGCGGGTTACAAAGAAGGCTTGAAGCACAACAAACTTGACT
TCAAAGAAGGACTTGTTTTTGAAGCTAATTATTCTTATAAAGAAGGTTTTGAATTGGCACAACGTGTGATTAACTCAGGA
GCAACAGCAGCTTATGTGGCTGAAGATGAGTTAGCAGCGGGTCTTTTAAATGGTTTGTTTGAAGCAGGCAAACGCGTTCC
AGAAGATTTTGAAATCATCACAAGCAATGATTCACCAGTTGTTCAATATACCCGTCCAAACTTGAGTTCTATCAGCCAAC
CCGTTTACGACTTGGGAGCTGTCAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGCGGAACCACTAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.778

100

0.778
  ccpA Streptococcus pneumoniae D39

75.976

100

0.76
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553