Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | ABWED_RS01270 | Genome accession | NZ_CP082143 |
| Coordinates | 290847..292271 (-) | Length | 474 a.a. |
| NCBI ID | WP_086044365.1 | Uniprot ID | A0A2K8UP47 |
| Organism | Acinetobacter lwoffii strain ED23-35 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 285847..297271
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWED_RS01255 (ABWED_0259) | lptG | 286901..287971 (+) | 1071 | WP_004281054.1 | LPS export ABC transporter permease LptG | - |
| ABWED_RS01260 (ABWED_0260) | gpmI | 288096..289643 (+) | 1548 | WP_222112348.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| ABWED_RS01265 (ABWED_0261) | - | 289674..290846 (+) | 1173 | WP_086044364.1 | S41 family peptidase | - |
| ABWED_RS01270 (ABWED_0262) | pilR | 290847..292271 (-) | 1425 | WP_086044365.1 | sigma-54 dependent transcriptional regulator | Regulator |
| ABWED_RS01275 (ABWED_0263) | pilS | 292286..293851 (-) | 1566 | WP_004281058.1 | PAS domain-containing sensor histidine kinase | Regulator |
| ABWED_RS01280 (ABWED_0264) | - | 293874..294509 (-) | 636 | WP_004281059.1 | response regulator | - |
| ABWED_RS01285 (ABWED_0265) | - | 294729..295790 (+) | 1062 | WP_004281060.1 | serine hydrolase | - |
| ABWED_RS01290 (ABWED_0266) | thrC | 295848..296987 (-) | 1140 | WP_004281061.1 | threonine synthase | - |
Sequence
Protein
Download Length: 474 a.a. Molecular weight: 53561.74 Da Isoelectric Point: 6.1616
>NTDB_id=599468 ABWED_RS01270 WP_086044365.1 290847..292271(-) (pilR) [Acinetobacter lwoffii strain ED23-35]
MNGEQQPLVLLVDDEEDLCTLMQMSLLRMGIRTHIAHRLEYAKKCLANHQYDACLTDLNLPDGNGLELLDWIGNLYPALP
VAVLTAYGNMEIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYSHNNPNDALEHKMLIGQSMPIQQLRITLQKIA
RSQAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGAAQDKQGLIQSAHGGSLFL
DEIAELPLSMQVKLLRAVQEKRIRPLGSDTEIDVDFRVISATHQDLEALVQQGKFRQDLYFRIHVMDLTLPPLRERGQDI
LLLAEHFIQKICQEWGISNKKLTERSKEFLLGQYYPGNVRELRNIMERAITLSDEERIDLQHLQSAPLRQALNSPQEMNT
LTSEIIATETLIAPKKLPEEGLELYLEKVEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEEDE
MNGEQQPLVLLVDDEEDLCTLMQMSLLRMGIRTHIAHRLEYAKKCLANHQYDACLTDLNLPDGNGLELLDWIGNLYPALP
VAVLTAYGNMEIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYSHNNPNDALEHKMLIGQSMPIQQLRITLQKIA
RSQAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGAAQDKQGLIQSAHGGSLFL
DEIAELPLSMQVKLLRAVQEKRIRPLGSDTEIDVDFRVISATHQDLEALVQQGKFRQDLYFRIHVMDLTLPPLRERGQDI
LLLAEHFIQKICQEWGISNKKLTERSKEFLLGQYYPGNVRELRNIMERAITLSDEERIDLQHLQSAPLRQALNSPQEMNT
LTSEIIATETLIAPKKLPEEGLELYLEKVEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEEDE
Nucleotide
Download Length: 1425 bp
>NTDB_id=599468 ABWED_RS01270 WP_086044365.1 290847..292271(-) (pilR) [Acinetobacter lwoffii strain ED23-35]
ATGAATGGGGAACAACAACCACTGGTGCTCTTGGTGGATGATGAGGAAGATTTATGTACCCTCATGCAAATGTCATTGCT
GCGCATGGGAATTCGCACGCACATTGCCCATCGTCTGGAATACGCTAAAAAATGCCTTGCCAATCATCAGTATGATGCCT
GTCTGACCGACCTGAATCTGCCCGATGGCAATGGTTTGGAGTTACTGGATTGGATTGGCAATCTTTACCCGGCACTTCCG
GTCGCGGTTCTGACCGCCTATGGCAACATGGAAATCGCCATTGCTGCGCTCAAAGCAGGGGCTTTTGACTTTGTCAGCAA
ACCGATTAATCAAAAACACCTGGAGCAGCTCTTACAAAAAGCGCTGAATAAACCGGTGGATTATTCGCATAATAATCCGA
ACGATGCACTCGAACATAAAATGCTGATTGGACAATCCATGCCAATTCAGCAATTACGCATTACCTTACAAAAAATTGCC
CGATCCCAGGCACCAGTTTTTATCACAGGGGAATCAGGCACAGGCAAGGAAGTCGTGGCCAATCTGGTACATCGCCTGAG
TAACCGCAACGAAGGTCCTTTTATTGCGATTAACTGTGGCGCCATTCCGACTGAGTTGATGGAAAGCGAACTGTTTGGGC
ATAAGAAAGGCAGCTTTACCGGCGCTGCTCAGGACAAACAGGGACTGATTCAATCTGCCCATGGTGGCAGTCTGTTTCTG
GATGAAATTGCAGAATTACCGCTTTCTATGCAGGTCAAATTGTTACGTGCCGTACAGGAAAAACGTATTCGTCCACTCGG
TTCGGATACCGAAATTGATGTGGATTTCCGTGTGATCAGTGCCACGCATCAGGATCTGGAAGCCTTGGTGCAACAAGGCA
AATTCCGTCAGGATTTATATTTCCGTATTCATGTAATGGATCTGACTTTACCGCCGCTGCGTGAACGCGGCCAGGATATT
CTGTTATTGGCCGAACACTTTATTCAGAAGATTTGCCAGGAATGGGGCATTTCCAATAAAAAACTGACCGAACGCAGCAA
AGAGTTCTTATTGGGACAATATTATCCAGGTAATGTACGTGAATTACGTAACATTATGGAACGCGCGATTACTTTAAGTG
ATGAAGAGCGGATTGATCTTCAGCATTTGCAGAGTGCACCGCTGCGTCAGGCGCTAAACAGCCCTCAGGAGATGAATACG
CTCACGAGCGAGATTATTGCGACCGAAACCCTGATTGCACCTAAAAAGCTGCCTGAAGAGGGTCTAGAGCTGTATTTGGA
AAAGGTCGAAAAAGAAATTTTACTCAATGCGCTGAATCTGACCCACTGGAACCGGACACTGGCCGCCAAAAAACTCGGCA
TGTCGTTCCGTTCCCTGCGCTATCGCTTGAAAAAGTTCGGACTGGATACCGAAGAAGATGAATAA
ATGAATGGGGAACAACAACCACTGGTGCTCTTGGTGGATGATGAGGAAGATTTATGTACCCTCATGCAAATGTCATTGCT
GCGCATGGGAATTCGCACGCACATTGCCCATCGTCTGGAATACGCTAAAAAATGCCTTGCCAATCATCAGTATGATGCCT
GTCTGACCGACCTGAATCTGCCCGATGGCAATGGTTTGGAGTTACTGGATTGGATTGGCAATCTTTACCCGGCACTTCCG
GTCGCGGTTCTGACCGCCTATGGCAACATGGAAATCGCCATTGCTGCGCTCAAAGCAGGGGCTTTTGACTTTGTCAGCAA
ACCGATTAATCAAAAACACCTGGAGCAGCTCTTACAAAAAGCGCTGAATAAACCGGTGGATTATTCGCATAATAATCCGA
ACGATGCACTCGAACATAAAATGCTGATTGGACAATCCATGCCAATTCAGCAATTACGCATTACCTTACAAAAAATTGCC
CGATCCCAGGCACCAGTTTTTATCACAGGGGAATCAGGCACAGGCAAGGAAGTCGTGGCCAATCTGGTACATCGCCTGAG
TAACCGCAACGAAGGTCCTTTTATTGCGATTAACTGTGGCGCCATTCCGACTGAGTTGATGGAAAGCGAACTGTTTGGGC
ATAAGAAAGGCAGCTTTACCGGCGCTGCTCAGGACAAACAGGGACTGATTCAATCTGCCCATGGTGGCAGTCTGTTTCTG
GATGAAATTGCAGAATTACCGCTTTCTATGCAGGTCAAATTGTTACGTGCCGTACAGGAAAAACGTATTCGTCCACTCGG
TTCGGATACCGAAATTGATGTGGATTTCCGTGTGATCAGTGCCACGCATCAGGATCTGGAAGCCTTGGTGCAACAAGGCA
AATTCCGTCAGGATTTATATTTCCGTATTCATGTAATGGATCTGACTTTACCGCCGCTGCGTGAACGCGGCCAGGATATT
CTGTTATTGGCCGAACACTTTATTCAGAAGATTTGCCAGGAATGGGGCATTTCCAATAAAAAACTGACCGAACGCAGCAA
AGAGTTCTTATTGGGACAATATTATCCAGGTAATGTACGTGAATTACGTAACATTATGGAACGCGCGATTACTTTAAGTG
ATGAAGAGCGGATTGATCTTCAGCATTTGCAGAGTGCACCGCTGCGTCAGGCGCTAAACAGCCCTCAGGAGATGAATACG
CTCACGAGCGAGATTATTGCGACCGAAACCCTGATTGCACCTAAAAAGCTGCCTGAAGAGGGTCTAGAGCTGTATTTGGA
AAAGGTCGAAAAAGAAATTTTACTCAATGCGCTGAATCTGACCCACTGGAACCGGACACTGGCCGCCAAAAAACTCGGCA
TGTCGTTCCGTTCCCTGCGCTATCGCTTGAAAAAGTTCGGACTGGATACCGAAGAAGATGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
73.84 |
100 |
0.738 |
| pilR | Pseudomonas aeruginosa PAK |
49.024 |
97.257 |
0.477 |