Detailed information NTG0598673

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: K5H97_RS08210
• Genome accession: NZ_CP081966
• Coordinates: 1804457..1806670 (+)
• Length: 737 a.a.
• NCBI ID: WP_028690975.1
• Uniprot ID: -
• Organism: Pseudomonas mosselii strain DSM 17497
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1799457..1811670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5H97_RS08180 (K5H97_08180)	-	1800417..1800656 (-)	240	WP_028690971.1	DUF3077 domain-containing protein	-
K5H97_RS08185 (K5H97_08185)	-	1800653..1800892 (-)	240	WP_036986124.1	hypothetical protein	-
K5H97_RS08190 (K5H97_08190)	-	1801323..1801946 (+)	624	WP_028690972.1	glutathione S-transferase	-
K5H97_RS08195 (K5H97_08195)	-	1802079..1803011 (+)	933	WP_028690973.1	ABC transporter ATP-binding protein	-
K5H97_RS08200 (K5H97_08200)	-	1803008..1803787 (+)	780	WP_028690974.1	ABC transporter permease	-
K5H97_RS08205 (K5H97_08205)	-	1803671..1804312 (-)	642	WP_139121109.1	DUF2062 domain-containing protein	-
K5H97_RS08210 (K5H97_08210)	comA	1804457..1806670 (+)	2214	WP_028690975.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
K5H97_RS08215 (K5H97_08215)	exbB	1806831..1807466 (+)	636	WP_028690976.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
K5H97_RS08220 (K5H97_08220)	-	1807463..1807897 (+)	435	WP_028690977.1	biopolymer transporter ExbD	-
K5H97_RS08225 (K5H97_08225)	lpxK	1807897..1808901 (+)	1005	WP_028690978.1	tetraacyldisaccharide 4'-kinase	-
K5H97_RS08230 (K5H97_08230)	-	1808936..1809121 (+)	186	WP_011532874.1	Trm112 family protein	-
K5H97_RS08235 (K5H97_08235)	kdsB	1809118..1809882 (+)	765	WP_028690979.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
K5H97_RS08240 (K5H97_08240)	-	1809882..1810346 (+)	465	WP_028690980.1	low molecular weight protein-tyrosine-phosphatase	-
K5H97_RS08245 (K5H97_08245)	murB	1810343..1811362 (+)	1020	WP_028690981.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 79763.57 Da
• Isoelectric Point: 11.2161

>NTDB_id=598673 K5H97_RS08210 WP_028690975.1 1804457..1806670(+) (comA) [Pseudomonas mosselii strain DSM 17497]
MRTGMLALVLGLLSLRFLPALPPVGWLIPLLLLALACLRTRARPLGWFVLGGCWACWSAQQALDDRLPAALDGRTLWLEG
RVVGLPTRTERGVRFELEQPQSRRARLPQRVQLSWFEGPPLRAGEHWRLAVNLRRPQGLLNPHGPDQEATLLARRVGATG
TVKAGMRQGEEASSWRDGLRQRLLATDAHGREAALAALVLGDGAGLAREDWQVLQATGTVHLLVISGQHIGLLAGLVYGL
VAGLARLGGWPRRLPWLPWACGLAMAAALGYGWLAGFGVPVQRACLMLAVVLLWRLRFRHLGAWVPLLMALSGVLLVEPL
ASLLPGFWLSFAAVAVLVLCFAARLGAWRPWQAWTRAQWVIAVGLLPVLLALGLPVSLSAPLANLLAVPWLSWGVLPLAL
LGTALLPVPGLGEGMLWLAGLSLDGLFAVLTRLAGLRPAWIPEPLPLWAWLLVCLGAVLVLLPRGVPLRAPGVVLLLALW
APREQVPPGQVEVWQLDVGQGLAVLLRTRNHALLYDAGPAQGGSDLGETVVLPTLRKLGVKALDMMLISHGHADHAGGAA
AVRRGVSVARVLAGEVAGLEAASLCRSGERWQWDGVDFELWHWPQGASSNERSCVLRVQAKGERLLLAGDMEAGAERAWL
AATDDPRVDWLQAPHHGSRTSSSEPFVQATAPRGVLVSRGRHNGFGHPHGQVVERYRRHGVVMHDTALEGALRLVLGSRG
GVEGVRRERRFWRAIED

Nucleotide

• Length: 2214 bp

>NTDB_id=598673 K5H97_RS08210 WP_028690975.1 1804457..1806670(+) (comA) [Pseudomonas mosselii strain DSM 17497]
ATGCGCACAGGGATGCTGGCGCTGGTCCTCGGGCTGTTGAGCCTGCGCTTTTTACCTGCCCTGCCACCGGTCGGATGGCT
GATTCCATTGCTGTTGCTGGCCCTGGCCTGCCTGCGCACCCGGGCCAGGCCGCTGGGTTGGTTCGTGCTGGGTGGCTGCT
GGGCCTGCTGGTCGGCGCAGCAGGCCCTGGACGACCGCCTGCCGGCCGCGCTGGATGGCCGCACGCTGTGGCTGGAGGGG
CGGGTGGTCGGCCTGCCGACCCGTACCGAGCGCGGCGTGCGTTTCGAGCTGGAGCAGCCGCAGTCACGTCGGGCCCGGTT
GCCGCAGCGGGTGCAATTGAGCTGGTTCGAGGGGCCGCCGCTGCGAGCGGGGGAGCACTGGCGGCTGGCGGTCAACCTGC
GTCGGCCGCAGGGCCTGCTCAACCCCCATGGCCCGGATCAGGAGGCCACGCTGTTGGCGCGGCGGGTCGGTGCCACCGGC
ACGGTCAAGGCCGGCATGCGCCAGGGCGAGGAGGCCAGCAGTTGGCGCGACGGCCTGCGCCAGCGCCTGCTGGCCACCGA
TGCCCATGGCCGGGAGGCGGCGTTGGCCGCCCTGGTGCTCGGGGATGGCGCAGGCCTGGCGCGGGAGGACTGGCAGGTGC
TGCAGGCCACCGGCACGGTACACCTGCTGGTGATTTCCGGGCAGCACATCGGCTTGCTGGCCGGATTGGTCTACGGGCTG
GTGGCGGGGCTGGCACGCCTGGGGGGGTGGCCACGGCGCCTGCCGTGGCTGCCCTGGGCCTGTGGCCTGGCGATGGCGGC
GGCATTGGGCTACGGCTGGCTGGCGGGGTTCGGCGTGCCGGTGCAGCGGGCGTGCCTGATGCTGGCGGTGGTGCTGCTCT
GGCGCTTGCGCTTTCGCCATCTGGGCGCCTGGGTGCCGTTGCTGATGGCGCTGTCGGGCGTGCTGCTGGTCGAGCCGCTG
GCCAGCCTGTTGCCGGGTTTCTGGCTGTCGTTCGCTGCCGTGGCGGTGCTGGTGCTGTGTTTTGCCGCCCGGCTGGGTGC
CTGGCGGCCCTGGCAGGCCTGGACCCGCGCCCAGTGGGTGATCGCCGTGGGGTTGCTGCCGGTGCTGCTGGCCTTGGGGC
TGCCCGTCAGTCTCAGCGCGCCGCTGGCCAATCTGCTGGCGGTGCCGTGGCTCAGCTGGGGCGTGCTGCCGTTGGCGTTG
CTGGGTACGGCCCTGCTGCCGGTGCCTGGGCTGGGGGAGGGGATGCTGTGGCTGGCGGGCCTGTCGTTGGATGGGTTGTT
TGCCGTGCTGACGCGATTGGCAGGGCTGCGGCCGGCCTGGATTCCCGAGCCACTGCCGTTGTGGGCCTGGCTGCTGGTGT
GCCTGGGCGCCGTGCTGGTGTTGCTGCCCCGGGGCGTGCCGTTGCGGGCGCCGGGCGTGGTCCTGCTGCTGGCGCTGTGG
GCGCCACGCGAACAGGTGCCGCCGGGGCAGGTGGAGGTCTGGCAGCTGGATGTGGGGCAGGGCCTGGCGGTGCTGCTGCG
CACCCGCAATCACGCGCTGCTGTATGACGCAGGCCCGGCCCAGGGTGGCAGTGACCTGGGCGAGACGGTGGTGCTGCCGA
CCTTGCGCAAGCTTGGGGTGAAGGCGCTGGATATGATGCTGATCAGCCATGGCCATGCCGACCATGCCGGTGGGGCGGCG
GCCGTGCGGCGTGGGGTTTCGGTGGCGCGAGTGCTGGCCGGCGAGGTTGCCGGGCTGGAAGCGGCCTCGCTGTGCCGCAG
TGGCGAGCGCTGGCAGTGGGATGGCGTCGATTTCGAGCTCTGGCACTGGCCGCAGGGGGCTTCCAGCAACGAACGCTCCT
GTGTGTTGCGCGTGCAGGCCAAGGGCGAACGCCTGCTGCTGGCCGGGGACATGGAGGCCGGTGCGGAGCGGGCCTGGCTG
GCCGCGACCGACGATCCTCGGGTGGACTGGTTGCAGGCGCCGCACCATGGCAGCCGCACGTCGTCCAGCGAGCCGTTCGT
CCAGGCCACGGCGCCGCGCGGGGTGTTGGTTTCCCGGGGGCGGCACAATGGTTTCGGGCATCCCCATGGGCAGGTGGTCG
AGCGCTATCGCCGGCACGGGGTGGTGATGCATGACACGGCGTTGGAGGGGGCGTTGCGGTTGGTGCTGGGGAGTCGGGGT
GGGGTGGAAGGTGTGCGGCGGGAACGTCGGTTCTGGCGCGCCATCGAGGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-664)

• Domain of unknown function (DUF4131) (DUF4131) (20-164)

• Competence protein (Competence) (198-462)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	60.028	97.422	0.585
comA	Ralstonia pseudosolanacearum GMI1000	35.522	100	0.411