Detailed information NTG0598572

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: K5Q02_RS20155
• Genome accession: NZ_CP081942
• Coordinates: 4376093..4378315 (-)
• Length: 740 a.a.
• NCBI ID: WP_225839791.1
• Uniprot ID: -
• Organism: Pseudomonas sp. MM211
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4371093..4383315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5Q02_RS20120 (K5Q02_20065)	murB	4371459..4372478 (-)	1020	WP_225833563.1	UDP-N-acetylmuramate dehydrogenase	-
K5Q02_RS20125 (K5Q02_20070)	-	4372475..4372939 (-)	465	WP_225833565.1	low molecular weight protein-tyrosine-phosphatase	-
K5Q02_RS20130 (K5Q02_20075)	kdsB	4372939..4373703 (-)	765	WP_225833567.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
K5Q02_RS20135 (K5Q02_20080)	-	4373705..4373890 (-)	186	WP_225833569.1	Trm112 family protein	-
K5Q02_RS20140 (K5Q02_20085)	lpxK	4373932..4374939 (-)	1008	WP_225833572.1	tetraacyldisaccharide 4'-kinase	-
K5Q02_RS20145 (K5Q02_20090)	-	4374939..4375367 (-)	429	WP_225833574.1	biopolymer transporter ExbD	-
K5Q02_RS20150 (K5Q02_20095)	exbB	4375364..4376020 (-)	657	WP_225833576.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
K5Q02_RS20155 (K5Q02_20100)	comA	4376093..4378315 (-)	2223	WP_225839791.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
K5Q02_RS20160 (K5Q02_20105)	-	4378405..4379649 (-)	1245	WP_225833578.1	lipoprotein-releasing ABC transporter permease subunit	-
K5Q02_RS20165 (K5Q02_20110)	lolD	4379649..4380353 (-)	705	WP_225833581.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
K5Q02_RS20170 (K5Q02_20115)	-	4380346..4381596 (-)	1251	WP_225833583.1	lipoprotein-releasing ABC transporter permease subunit	-
K5Q02_RS20175 (K5Q02_20120)	-	4381692..4382264 (+)	573	WP_225833585.1	PilZ domain-containing protein	-
K5Q02_RS20180 (K5Q02_20125)	-	4382261..4382557 (+)	297	WP_225833587.1	phosphodiesterase	-
K5Q02_RS20185 (K5Q02_20130)	-	4382567..4383286 (+)	720	WP_225833588.1	glycerophosphodiester phosphodiesterase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 80784.57 Da
• Isoelectric Point: 8.1167

>NTDB_id=598572 K5Q02_RS20155 WP_225839791.1 4376093..4378315(-) (comA) [Pseudomonas sp. MM211]
MRNGLLALAAGLLLLRFIPQLPPASMLLVSGLVGLALLPFRTYPIGLFLLGFSWACTSAQWALDDRLDPALDGRTLWLEG
RVVDLPDVREGVVRFHLQQPQSRRAQLPQLLRLSWYGGPDIRAGETWRLAVNLKRPHGLVNPQSFDYEAWLLAQRIGGVG
TIKSGQRLSEAGGSGAWRDGLRQRMLAEDPHGRAGGLAALVLGDGSGLSVADWRVLQDTGTVHLLVISGQHVTLVAGMFY
GLVFWLARLGWWPRVVPWLPTACILAFSSALGYSLLAGFEVPVQRACAMIGLVLLWRWRFRHLGITLPLLVALVTVLLLE
PLAVLQPGFWLSFGAVGLLILIFAARLGAWAWWRTLGRAQWAMTVGLLPMLLALGLPISASSPLANLIAVPWVGFAVVPP
ALLGTLLLPVPWLGEALLWWAGFALEWLFRLLALMAAWLPAWLPSALPLWAWLLVALGALLILLPSGVPLRGLGLILLLP
LLFAPVQRPAEQRAEVWMLDVGQGLSMLVLTGEHALLYDAGPSFGDFDMGERVVLPSLRALDVRALDMLLLSHSDNDHSG
GAEAVARGIPVSRVVSGEAPALPAVLQAEPCREESWTWNGVHFSTWRWADATDSNQSSCVLMIEAAGERILLTGDIDGRA
ERALIDTGRDLQAQWLLAPHHGSRSSSSWALLKAVTPEAVLYSRGRHNAYGHPHPAVVSRYAAFNARAYDSVETGALRID
LGTFGEPHALREIARFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=598572 K5Q02_RS20155 WP_225839791.1 4376093..4378315(-) (comA) [Pseudomonas sp. MM211]
CTGCGCAATGGGTTGCTCGCATTGGCAGCGGGGCTTTTGCTGCTGCGCTTTATACCGCAACTGCCGCCAGCCTCCATGTT
GCTGGTGTCGGGCCTGGTAGGTCTGGCGCTGTTGCCTTTTCGCACGTATCCCATCGGCCTGTTTCTGCTCGGTTTCAGCT
GGGCATGCACTTCTGCGCAATGGGCGCTGGATGATCGCCTAGACCCGGCCCTCGATGGTCGCACCCTGTGGCTGGAAGGC
AGGGTGGTGGACTTGCCGGATGTGCGCGAGGGTGTGGTGCGCTTTCATCTGCAGCAGCCGCAATCGCGCCGTGCCCAGTT
ACCGCAGCTGTTGCGTCTGTCCTGGTATGGCGGGCCGGATATTCGCGCTGGCGAAACCTGGCGGCTGGCGGTCAACCTCA
AGCGCCCCCATGGTCTGGTCAATCCGCAGTCCTTCGATTACGAGGCCTGGTTGTTGGCCCAGCGCATCGGCGGTGTCGGC
ACCATCAAGTCCGGACAGCGTTTGAGTGAGGCGGGTGGTAGTGGCGCTTGGCGAGATGGTTTGCGCCAGCGGATGCTCGC
AGAGGATCCCCATGGCCGTGCGGGCGGATTGGCCGCGCTGGTGCTTGGTGATGGCTCAGGCCTCTCGGTGGCCGACTGGC
GCGTGCTGCAGGATACCGGCACGGTGCACCTGCTGGTGATCTCTGGCCAGCATGTGACATTGGTGGCTGGCATGTTTTAC
GGCTTGGTGTTCTGGCTGGCGAGGTTGGGCTGGTGGCCACGGGTCGTGCCCTGGTTGCCGACGGCCTGCATTCTGGCCTT
CTCTTCGGCATTGGGGTACAGCCTGCTGGCTGGCTTCGAGGTGCCGGTGCAGCGCGCCTGCGCGATGATCGGCCTGGTAC
TGCTATGGCGTTGGCGCTTTCGCCACCTGGGCATCACCTTGCCGCTGCTGGTGGCGTTGGTCACGGTACTGCTGCTGGAG
CCGCTGGCGGTATTGCAGCCGGGCTTCTGGTTGTCGTTCGGCGCCGTGGGGCTGCTTATTCTGATCTTCGCTGCACGCCT
CGGTGCCTGGGCTTGGTGGCGCACGCTGGGGCGCGCGCAGTGGGCGATGACCGTGGGGTTGTTGCCGATGCTCCTGGCCC
TGGGGCTGCCTATCAGTGCCAGCAGTCCGCTGGCCAATCTGATCGCCGTGCCTTGGGTCGGTTTCGCCGTGGTGCCGCCC
GCATTGCTCGGTACCCTGTTGCTACCTGTTCCCTGGTTGGGGGAGGCCTTGCTGTGGTGGGCCGGTTTCGCCCTGGAGTG
GCTGTTTCGTCTTTTGGCGTTGATGGCTGCTTGGTTGCCGGCCTGGTTGCCGAGCGCACTGCCGTTATGGGCCTGGTTGC
TGGTGGCGCTGGGCGCCCTGTTGATTCTACTGCCCAGCGGCGTTCCACTGCGGGGGCTGGGCCTGATCCTGCTCTTGCCT
CTGTTGTTCGCGCCGGTGCAACGGCCGGCCGAACAGCGTGCTGAAGTGTGGATGCTGGATGTCGGTCAGGGCTTGTCGAT
GCTGGTGCTGACTGGCGAGCATGCCTTGCTCTACGACGCTGGCCCCAGTTTTGGTGATTTCGATATGGGTGAACGGGTAG
TGCTGCCATCGCTAAGGGCGTTGGATGTGCGCGCACTCGACATGCTGCTGCTCAGCCACTCCGATAACGACCACTCTGGC
GGGGCTGAAGCCGTGGCTCGCGGAATACCTGTGAGCCGAGTCGTTAGTGGCGAAGCACCGGCGCTACCGGCTGTACTGCA
GGCTGAGCCCTGTAGAGAAGAAAGCTGGACGTGGAATGGCGTGCATTTCAGTACCTGGCGTTGGGCGGATGCTACTGACA
GCAATCAGTCATCCTGCGTGCTGATGATTGAAGCCGCGGGGGAGCGCATCTTGCTGACCGGCGATATCGACGGGCGCGCC
GAGCGAGCGCTGATCGATACGGGGCGAGATCTGCAGGCCCAGTGGCTGCTGGCACCTCATCACGGCAGTCGCAGTTCATC
CTCCTGGGCCCTGCTCAAGGCGGTCACGCCTGAGGCGGTGTTGTATTCCCGCGGTCGGCACAATGCCTATGGCCATCCTC
ACCCTGCAGTCGTCTCACGTTATGCGGCGTTTAACGCCAGGGCGTACGACAGTGTCGAGACCGGTGCGCTGCGTATCGAT
CTCGGCACCTTTGGCGAGCCACATGCCTTACGTGAAATAGCGCGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (12-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-679)

• Competence protein (Competence) (200-465)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	64.861	97.297	0.631
comA	Ralstonia pseudosolanacearum GMI1000	36.399	100	0.38