Detailed information NTG0598570

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: K5Q02_RS17150
• Genome accession: NZ_CP081942
• Coordinates: 3730173..3731387 (-)
• Length: 404 a.a.
• NCBI ID: WP_225832497.1
• Uniprot ID: -
• Organism: Pseudomonas sp. MM211
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3725173..3736387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5Q02_RS17130 (K5Q02_17085)	-	3725840..3726610 (+)	771	WP_225832490.1	3-hydroxybutyrate dehydrogenase	-
K5Q02_RS17135 (K5Q02_17090)	-	3726671..3728626 (+)	1956	WP_225832491.1	acetoacetate--CoA ligase	-
K5Q02_RS17140 (K5Q02_17095)	-	3728810..3729529 (+)	720	WP_225832493.1	transporter substrate-binding domain-containing protein	-
K5Q02_RS17145 (K5Q02_17100)	-	3729599..3730117 (+)	519	WP_225832495.1	thioredoxin family protein	-
K5Q02_RS17150 (K5Q02_17105)	pilU	3730173..3731387 (-)	1215	WP_225832497.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
K5Q02_RS17155 (K5Q02_17110)	-	3731536..3731814 (+)	279	WP_225832499.1	peptidylprolyl isomerase	-
K5Q02_RS17160 (K5Q02_17115)	sseA	3731935..3732786 (+)	852	WP_225832500.1	3-mercaptopyruvate sulfurtransferase	-
K5Q02_RS17165 (K5Q02_17120)	ssuD	3733664..3734821 (+)	1158	WP_225832503.1	FMNH2-dependent alkanesulfonate monooxygenase	-
K5Q02_RS17170 (K5Q02_17125)	-	3734818..3736005 (+)	1188	WP_225832506.1	acyl-CoA dehydrogenase family protein	-

Sequence

Protein

• Length: 404 a.a.
• Molecular weight: 44619.01 Da
• Isoelectric Point: 5.7580

>NTDB_id=598570 K5Q02_RS17150 WP_225832497.1 3730173..3731387(-) (pilU) [Pseudomonas sp. MM211]
MDLQAMLKILSSQDGSDLYLSTGAPPCAKFNGVLKALSGEPLKAGAVADIADAIMDSAQKEEFERELEMNLAISINGVGR
FRINIFKQRNEVSIVARNIKLDIPRFEDLKLPEVLLKTVMEKRGLVLFVGGTGSGKSTSLAALIDYRNRNSGGHIITIED
PVEYVHRHKKSIINQREVGVDTRSFHAALKNTLRQAPDVILIGEIRDRETMEHALAFADTGHLAISTLHANNANQALDRI
INFFPEDRRPQLLNDLGNNLKAFVSQRLVKTTDGKRRAAVEVLLGTPTIRDLIKRNEFAEIKEIMEKSKNLGMQTFDQAL
IDLVNEGAIDEEEAVKNADSANNVRLKLKLYRENPAVPTPVAQAAPTAEVSPPKVAEATDWGLELKLEDIEVETPPEDPG
RRGI

Nucleotide

• Length: 1215 bp

>NTDB_id=598570 K5Q02_RS17150 WP_225832497.1 3730173..3731387(-) (pilU) [Pseudomonas sp. MM211]
ATGGACCTTCAAGCAATGCTGAAAATTCTCTCCAGCCAGGACGGCTCCGACCTGTATCTGTCGACCGGCGCGCCGCCGTG
CGCCAAGTTCAATGGCGTGCTCAAGGCGTTGAGTGGGGAGCCACTGAAGGCTGGGGCCGTGGCCGATATCGCCGATGCCA
TCATGGATAGCGCGCAGAAGGAGGAGTTCGAGCGCGAGCTGGAAATGAACCTGGCGATCTCCATCAACGGCGTCGGGCGT
TTTCGCATCAACATCTTCAAACAGCGCAATGAAGTGTCCATTGTCGCCCGTAACATCAAGCTCGACATCCCGCGTTTCGA
GGATTTGAAGCTGCCTGAGGTACTGCTCAAGACCGTGATGGAAAAGCGCGGACTGGTGCTGTTCGTGGGTGGCACCGGCT
CGGGTAAGTCGACTTCGCTGGCGGCCCTGATTGACTATCGCAATCGCAACAGCGGCGGACACATCATTACTATCGAGGAT
CCGGTGGAGTACGTGCACCGGCACAAGAAGTCGATAATCAACCAGCGGGAGGTGGGTGTGGACACGCGCAGTTTCCACGC
GGCGCTGAAAAATACCCTGCGTCAGGCGCCGGACGTGATCCTGATCGGCGAAATCCGTGACCGCGAAACCATGGAGCACG
CCCTGGCCTTTGCTGATACCGGGCACTTGGCGATTTCTACCCTGCATGCCAACAACGCCAACCAGGCGCTGGATCGGATC
ATCAATTTCTTCCCCGAGGATCGCCGGCCGCAGCTGCTCAACGATCTGGGCAACAACCTCAAGGCCTTTGTCTCTCAGCG
CCTGGTCAAAACTACTGACGGCAAGCGCCGGGCAGCCGTCGAAGTGCTGCTCGGTACGCCGACCATCCGCGACCTGATCA
AGCGCAACGAGTTTGCCGAGATCAAGGAAATCATGGAGAAATCCAAGAACCTCGGCATGCAGACCTTCGACCAAGCGCTG
ATCGACCTGGTGAACGAAGGGGCCATCGACGAGGAGGAGGCGGTCAAGAACGCCGATTCGGCGAACAACGTGCGCCTCAA
ACTCAAGCTCTATCGCGAGAATCCAGCTGTGCCAACGCCCGTGGCGCAGGCCGCACCGACAGCGGAGGTAAGCCCACCGA
AGGTTGCCGAAGCCACAGACTGGGGGCTGGAACTGAAACTCGAAGACATCGAAGTGGAAACGCCACCCGAAGATCCGGGC
CGCCGCGGCATCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	55.932	87.624	0.49
pilU	Acinetobacter baylyi ADP1	52.113	87.871	0.458
pilU	Vibrio cholerae strain A1552	52.125	87.376	0.455