Detailed information NTG0597064

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NAG71_RS21625
• Genome accession: NZ_CP097883
• Coordinates: 4434464..4435489 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4429464..4440489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NAG71_RS21605	metJ	4430525..4430842 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NAG71_RS21610	yiiX	4431026..4431634 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NAG71_RS21615	rpmE	4431695..4431907 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NAG71_RS21620	priA	4432110..4434308 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
NAG71_RS21625	cytR	4434464..4435489 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NAG71_RS21630	ftsN	4435581..4436540 (+)	960	WP_000068828.1	cell division protein FtsN	-
NAG71_RS21635	hslV	4436633..4437163 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NAG71_RS21640	hslU	4437173..4438504 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NAG71_RS21645	menA	4438571..4439497 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NAG71_RS21650	rraA	4439590..4440075 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NAG71_RS21655	zapB	4440160..4440405 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=597064 NAG71_RS21625 WP_000644904.1 4434464..4435489(+) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=597064 NAG71_RS21625 WP_000644904.1 4434464..4435489(+) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628