Detailed information    

insolico Bioinformatically predicted

Overview

Name   comR   Type   Regulator
Locus tag   M9H69_RS01270 Genome accession   NZ_CP097843
Coordinates   227511..228431 (+) Length   306 a.a.
NCBI ID   WP_250315708.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 222511..233431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS01250 (M9H69_01250) yajC 223229..223549 (+) 321 WP_001069056.1 preprotein translocase subunit YajC -
  M9H69_RS01255 (M9H69_01255) - 223597..224040 (+) 444 WP_250315705.1 low molecular weight protein-tyrosine-phosphatase -
  M9H69_RS01260 (M9H69_01260) - 224027..224437 (+) 411 WP_250315706.1 MORN repeat-containing protein -
  M9H69_RS01265 (M9H69_01265) adhE 224736..227387 (+) 2652 WP_250315707.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase -
  M9H69_RS01270 (M9H69_01270) comR 227511..228431 (+) 921 WP_250315708.1 XRE family transcriptional regulator Regulator
  M9H69_RS01275 (M9H69_01275) - 228607..229290 (+) 684 WP_009730765.1 ABC transporter ATP-binding protein -
  M9H69_RS01280 (M9H69_01280) - 229259..230560 (+) 1302 WP_198006247.1 ABC transporter permease -
  M9H69_RS01285 (M9H69_01285) gap 230738..231748 (+) 1011 WP_000260673.1 type I glyceraldehyde-3-phosphate dehydrogenase -
  M9H69_RS01290 (M9H69_01290) - 231819..232694 (-) 876 WP_080566840.1 RluA family pseudouridine synthase -

Sequence

Protein


Download         Length: 306 a.a.        Molecular weight: 36257.50 Da        Isoelectric Point: 4.6262

>NTDB_id=596571 M9H69_RS01270 WP_250315708.1 227511..228431(+) (comR) [Streptococcus oralis strain HP01]
MREVNELGEKVRILREEKGLGRPVFCGDESELSVRQLVRIEKGEFRPTIKTLEYIANRLDIPTYILMPDYKELPKRYQEL
KYFLLHHPDYGDKELQEQKEEYFDEIFEYFYDDLPRDEKVVVDCLQAIDAVRATGNSLYGDSVLENGLRDLLSRDVYKAE
DLLKLRLYFNCQLMDGLNVGEIKESEHETILYFHDKLSSQVDKIGFDCLDLLRDSLLASLTCIEIMGLLHYFKRAVETLN
KIGQKTRDFQKQPIVLMVEWKYYIQTDYETAKQKYEEAKMMARMFGNEKLLVSLDNEWAEDLERYL

Nucleotide


Download         Length: 921 bp        

>NTDB_id=596571 M9H69_RS01270 WP_250315708.1 227511..228431(+) (comR) [Streptococcus oralis strain HP01]
ATGAGAGAAGTAAATGAATTAGGAGAGAAGGTACGGATCCTTAGAGAGGAGAAAGGGCTTGGTCGTCCAGTCTTTTGCGG
GGATGAGTCTGAATTATCCGTTCGTCAGTTGGTGCGCATTGAAAAGGGAGAATTTCGTCCTACGATAAAAACACTAGAAT
ATATAGCGAATAGGCTAGATATTCCAACCTATATTCTGATGCCAGACTATAAGGAATTACCCAAGCGTTACCAAGAATTA
AAATACTTTCTTCTTCATCATCCTGACTATGGAGATAAAGAGTTACAGGAACAGAAGGAAGAATATTTTGATGAGATTTT
TGAATATTTTTATGATGATTTGCCACGTGATGAGAAAGTGGTAGTGGATTGTCTTCAAGCTATAGATGCAGTGAGAGCGA
CTGGTAATTCCTTGTATGGTGATAGTGTGCTTGAGAATGGTTTACGAGACTTACTATCCAGAGATGTATATAAAGCCGAG
GACTTGTTGAAATTGAGACTGTATTTCAACTGTCAGTTAATGGATGGTTTAAATGTGGGTGAGATAAAAGAATCTGAGCA
TGAAACCATTCTTTATTTTCATGACAAATTAAGTTCTCAGGTTGATAAGATAGGGTTCGATTGTTTGGACTTACTTAGAG
ACTCCTTGTTAGCTTCTTTAACTTGTATAGAGATTATGGGGTTGCTTCATTATTTTAAGAGGGCAGTCGAGACCTTAAAT
AAAATAGGGCAAAAAACACGAGATTTTCAAAAACAACCGATTGTCTTGATGGTGGAGTGGAAATATTATATTCAGACGGA
TTATGAAACAGCCAAACAAAAGTATGAAGAAGCAAAAATGATGGCAAGGATGTTTGGCAATGAGAAGTTACTCGTTAGTT
TAGATAATGAATGGGCCGAGGATCTAGAAAGATATCTTTAA

Domains

Predicted by InterProScan.

ComR tetratricopeptide (ComR_TPR)

(74-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comR Streptococcus suis D9

37.209

98.366

0.366
  comR Streptococcus pyogenes MGAS315

36.039

100

0.363
  comR Streptococcus mutans UA159

36.877

98.366

0.363