Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LOCK900_RS07250 Genome accession   NC_021723
Coordinates   1533415..1534656 (-) Length   413 a.a.
NCBI ID   WP_005689610.1    Uniprot ID   A0A0E3CQJ6
Organism   Lacticaseibacillus rhamnosus LOCK900     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1528415..1539656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOCK900_RS07245 (LOCK900_1565) - 1531661..1533391 (-) 1731 WP_005711690.1 proline--tRNA ligase -
  LOCK900_RS07250 (LOCK900_1566) eeP 1533415..1534656 (-) 1242 WP_005689610.1 RIP metalloprotease RseP Regulator
  LOCK900_RS07255 (LOCK900_1567) - 1534673..1535461 (-) 789 WP_005711688.1 phosphatidate cytidylyltransferase -
  LOCK900_RS07260 (LOCK900_1568) - 1535497..1536249 (-) 753 WP_005689614.1 isoprenyl transferase -
  LOCK900_RS07265 (LOCK900_1569) frr 1536525..1537082 (-) 558 WP_005684323.1 ribosome recycling factor -
  LOCK900_RS07270 (LOCK900_1570) pyrH 1537082..1537801 (-) 720 WP_005684324.1 UMP kinase -
  LOCK900_RS07275 (LOCK900_1571) tsf 1538168..1539049 (-) 882 WP_005684325.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45280.89 Da        Isoelectric Point: 8.0452

>NTDB_id=59601 LOCK900_RS07250 WP_005689610.1 1533415..1534656(-) (eeP) [Lacticaseibacillus rhamnosus LOCK900]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSIILNDAGKVTRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDEEKLERWSVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLIVNFAGPMNNFILAILTFIIYGLMFGVQVLNTNQIGTVLPGYPAAQAGLKSNATIQAIDGEKIHSFTDL
SSKVSKQAGKSVTFTVKEHGKTQNVVIKPNKDGKIGVEALIEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLQGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIELIRRKPLKPETEGVVTMVGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=59601 LOCK900_RS07250 WP_005689610.1 1533415..1534656(-) (eeP) [Lacticaseibacillus rhamnosus LOCK900]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTATTTTGCCAA
GCGTAGCGGAATATTAGTGCGTGAGTTTTCGATTGGCATGGGGCCTAAGCTATGGGCGTCACATAAGAATAATACGACCT
ATACCTTGCGCTTGTTGCCACTGGGCGGATATGTACGTATGGCTGGCTGGCAGGATGAGGAAGATGAAATCAAGCCTGGG
ACCATGCTGAGTATTATCCTGAATGATGCCGGTAAAGTGACACGGATTAATGCCAGTGATAAAACGACGCTGGCAGGTGG
CATGCCGGTACAAGTAAGCCGCGTAGACCTCGTTAAAGACTTGGTGATTGAAGGCTACCCTAATGGCGACGAGGAGAAAC
TGGAGCGTTGGTCGGTTGACCATGATGCCACGATTATTGAAGAAGATGGCACCGAAGTTCAAATTGCGCCAGAAGATGTC
CAATTTCAAAACGCCCCGGTTTGGCGGCGTCTAATTGTTAATTTTGCCGGTCCGATGAATAATTTTATTCTTGCCATTTT
GACCTTTATTATTTACGGTTTGATGTTTGGCGTGCAGGTCTTAAACACCAATCAAATCGGAACGGTACTGCCCGGTTATC
CTGCTGCTCAAGCCGGGCTTAAGTCAAATGCCACAATTCAGGCGATTGATGGTGAAAAAATCCATTCTTTTACTGATCTT
TCCAGCAAAGTCAGCAAACAGGCCGGTAAGTCGGTGACGTTTACAGTTAAAGAGCATGGCAAAACGCAAAATGTGGTTAT
CAAGCCTAACAAGGATGGCAAGATCGGCGTGGAAGCACTCATCGAAAAATCACCGGCACGGGCGTTTACGTATGGTTTCA
CCCAAACCTGGGATTTAGCTGTGCGCACTTGGGATGTCCTCAAATCCATGGTGACTGGCGGCTTTTCGCTTAATAAGTTA
GCTGGGCCGGTCGGGATTTATACCATGACCAGTCAAAGTGCTAAAGGTGGATTGCAGGGATTGCTATTCTTTATGGGATA
CTTAAGTCTCGGCTTGGGAATCAGCAATTTGTTGCCAATCCCGGTTCTGGATGGTGGTAAAATTTTACTGAATCTCATTG
AACTGATTCGGCGCAAACCGTTGAAGCCTGAAACAGAAGGTGTTGTCACCATGGTTGGCCTCGGGTTGATGGTGCTCCTG
ATGCTCGCCGTGACGATTAATGATATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E3CQJ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.057

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501

Multiple sequence alignment