Detailed information NTG0595635

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: K3169_RS09190
• Genome accession: NZ_CP081201
• Coordinates: 2067279..2069495 (+)
• Length: 738 a.a.
• NCBI ID: WP_263271120.1
• Uniprot ID: -
• Organism: Pseudomonas phytophila strain ICMP 23753
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2062279..2074495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3169_RS09165 (K3169_09125)	-	2063150..2063779 (+)	630	WP_027898167.1	L-threonylcarbamoyladenylate synthase	-
K3169_RS09170 (K3169_09130)	-	2063899..2064597 (+)	699	WP_263272249.1	segregation and condensation protein A	-
K3169_RS09175 (K3169_09135)	scpB	2064608..2065375 (+)	768	WP_231675718.1	SMC-Scp complex subunit ScpB	-
K3169_RS09180 (K3169_09140)	-	2065478..2065669 (+)	192	WP_027898767.1	DUF1289 domain-containing protein	-
K3169_RS09185 (K3169_09145)	rluB	2065867..2067123 (+)	1257	WP_099269606.1	23S rRNA pseudouridine(2605) synthase RluB	-
K3169_RS09190 (K3169_09150)	comA	2067279..2069495 (+)	2217	WP_263271120.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
K3169_RS09195 (K3169_09155)	exbB	2069577..2070251 (+)	675	WP_027898764.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
K3169_RS09200 (K3169_09160)	-	2070248..2070679 (+)	432	WP_027898763.1	ExbD/TolR family protein	-
K3169_RS09205 (K3169_09165)	lpxK	2070679..2071674 (+)	996	WP_231665717.1	tetraacyldisaccharide 4'-kinase	-
K3169_RS09210 (K3169_09170)	-	2071692..2071877 (+)	186	WP_027898761.1	Trm112 family protein	-
K3169_RS09215 (K3169_09175)	kdsB	2071874..2072638 (+)	765	WP_099269609.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
K3169_RS09220 (K3169_09180)	murB	2072635..2073654 (+)	1020	WP_263271124.1	UDP-N-acetylmuramate dehydrogenase	-
K3169_RS09225 (K3169_09185)	-	2073839..2074432 (+)	594	WP_263271126.1	NTP transferase domain-containing protein	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 81216.53 Da
• Isoelectric Point: 9.7500

>NTDB_id=595635 K3169_RS09190 WP_263271120.1 2067279..2069495(+) (comA) [Pseudomonas phytophila strain ICMP 23753]
MRTGMFALALGLLALRFLPALPPVWVLLCMPVLALMLLPFRTYPVAFFLFGFTWACVSAQWALDDRLSPRLDGQTVWLQG
KVVGLPAVAEGVVRFELEDLQSRRFKLPERVRVAWYGGPEIRSGERWRLAVKLKRPGGLANPHAFDYEAWLLAQRIGATG
TVADGQQLAFARSGWRDVIRQRLLAVDAQGREGGLAALVLGDGSGLSAVDWQILQDTGTVHLLVISGQHVGLLAAVMYAL
IAGLARWGLWPRALPWLPWACGLAFIAALGYGLLAGFEVPVRRACVMVGMVLLWRLRFRHLGAVLPLLLSLNAVLVFEPL
ASLQPGFWLSFIAVAILILIFGGRLGAWSWLQSWTRAQWLIAIGLLPVLLALNLPISLSGPFANLVAVPWVSFLILPPAL
LGTLLLPVPYLGEGLLWLAGGALEWLFRFLGWVAEWLPAWVPTAMPLWAWVLSLLGGVLLLLPSGVPLRGLGWPMLLLCV
FPPLKNVPHGQVDVLHLDVGQGLAILLRTRHHALLYDAGPRFGEFDIGQRVVLPAIRKSGVRQLDVMLISHADADHAGGA
QAVHQGLPVKRVLGGELERLPPSLKAQLCVNDERWEWDGVVFSTWRWSDAREGNQASCVLMVDARGERLLLTGDIDAEAE
QALIDTGLDVRANWLQAPHHGSRTSSSKSFLRAVAPDGVLISRGRNNAFGHPHPLVMARYQWFGIPTWDSADLGAISLQL
GTFDKPRSQRAERRFWRD

Nucleotide

• Length: 2217 bp

>NTDB_id=595635 K3169_RS09190 WP_263271120.1 2067279..2069495(+) (comA) [Pseudomonas phytophila strain ICMP 23753]
ATGCGCACAGGGATGTTCGCGCTGGCCTTGGGTTTGTTGGCTTTACGCTTCTTGCCGGCATTGCCCCCGGTCTGGGTGTT
GCTGTGCATGCCAGTGCTGGCCTTGATGCTGTTGCCCTTTCGCACGTACCCGGTGGCTTTCTTTTTATTCGGATTCACCT
GGGCATGCGTTTCGGCTCAATGGGCACTGGATGATCGTCTTTCACCACGGCTGGACGGCCAGACCGTGTGGTTACAAGGC
AAGGTCGTCGGTTTGCCTGCCGTTGCCGAAGGCGTAGTGCGCTTTGAGCTGGAAGACCTGCAATCTCGACGCTTTAAATT
GCCGGAGCGCGTGCGCGTGGCCTGGTATGGCGGCCCGGAAATTCGCAGTGGCGAGCGCTGGCGTCTGGCGGTCAAGCTCA
AGCGCCCCGGCGGATTGGCCAATCCACATGCTTTTGATTACGAGGCCTGGCTGCTGGCCCAGCGTATCGGCGCTACAGGC
ACAGTCGCCGATGGACAGCAGCTGGCATTTGCCCGTTCAGGCTGGCGGGATGTGATACGCCAGCGTTTGCTGGCGGTTGA
TGCGCAGGGTCGTGAAGGCGGTCTGGCCGCGCTGGTTCTGGGTGATGGCTCGGGACTCAGCGCGGTCGACTGGCAGATCC
TGCAAGACACCGGCACCGTGCATCTTCTGGTCATATCCGGGCAGCACGTGGGGTTGCTGGCCGCTGTGATGTACGCGCTG
ATCGCAGGCCTGGCACGTTGGGGATTATGGCCGCGCGCGCTGCCTTGGTTGCCATGGGCGTGCGGACTGGCGTTCATTGC
CGCGCTGGGGTACGGCTTGCTCGCGGGCTTTGAAGTGCCGGTACGCCGGGCGTGCGTGATGGTCGGCATGGTCTTGCTTT
GGCGGTTGCGTTTTCGGCATCTAGGGGCTGTCTTGCCGCTGCTGCTGTCGCTGAATGCCGTGCTGGTGTTCGAGCCGTTG
GCCAGTTTGCAGCCGGGTTTCTGGCTGTCCTTTATCGCTGTTGCAATCCTGATTCTGATATTTGGCGGGCGGCTGGGTGC
CTGGAGTTGGCTGCAAAGCTGGACCCGCGCCCAGTGGTTGATCGCCATTGGTTTGTTGCCGGTGTTGCTGGCGCTGAATC
TGCCCATCAGTTTGAGTGGTCCGTTTGCCAATCTTGTCGCGGTGCCTTGGGTGAGTTTTCTGATCCTCCCGCCTGCGCTG
CTCGGGACCTTGCTGCTGCCGGTTCCTTATCTGGGTGAAGGGCTGTTGTGGCTGGCGGGTGGTGCGCTGGAATGGTTGTT
CAGATTTCTCGGGTGGGTCGCCGAGTGGTTGCCCGCCTGGGTGCCGACTGCCATGCCGCTATGGGCCTGGGTATTGAGTC
TGCTGGGCGGTGTGTTGTTGCTGTTGCCCAGCGGCGTGCCGTTACGAGGGCTGGGTTGGCCGATGTTGCTGCTTTGCGTG
TTCCCGCCCTTGAAAAACGTGCCTCATGGTCAAGTCGACGTCCTGCATCTAGACGTGGGGCAGGGGTTGGCGATTCTCTT
GCGCACGCGACATCACGCGCTCCTGTACGACGCCGGGCCGCGCTTTGGCGAGTTTGATATAGGTCAACGGGTCGTGTTAC
CCGCCATCCGCAAGAGCGGCGTGCGCCAACTTGATGTGATGCTGATCAGCCATGCCGACGCCGACCATGCCGGTGGTGCG
CAGGCGGTTCATCAAGGCTTGCCGGTCAAGCGGGTGCTGGGGGGCGAGCTGGAAAGGCTGCCGCCGTCGCTGAAAGCGCA
ACTCTGCGTCAATGACGAACGCTGGGAGTGGGACGGTGTGGTGTTTTCAACCTGGCGCTGGAGTGATGCCCGAGAGGGGA
ATCAGGCTTCGTGTGTGTTAATGGTCGATGCCCGGGGCGAACGTTTGTTGCTGACAGGGGATATTGATGCCGAAGCCGAA
CAGGCCCTGATCGACACTGGTCTTGATGTACGTGCCAACTGGTTGCAAGCGCCGCACCACGGCAGCCGCACCTCCTCCTC
GAAAAGCTTTCTGCGTGCGGTCGCTCCTGATGGTGTGTTGATCTCCCGAGGGCGCAATAATGCCTTCGGGCACCCGCATC
CGCTGGTCATGGCGCGCTATCAATGGTTCGGTATTCCCACCTGGGACAGCGCCGACCTGGGTGCCATCAGCCTGCAACTC
GGTACGTTCGACAAACCCCGTTCACAGCGGGCCGAGAGGCGATTCTGGCGTGACTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-463)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-681)

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.966	97.019	0.621
comA	Ralstonia pseudosolanacearum GMI1000	34.135	100	0.385