Detailed information NTG0595601

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: K3819_RS21510
• Genome accession: NZ_CP081200
• Coordinates: 4761003..4763246 (-)
• Length: 747 a.a.
• NCBI ID: WP_221397907.1
• Uniprot ID: -
• Organism: Pseudomonas sp. 3-2
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4756003..4768246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3819_RS21475 (K3819_21475)	murB	4756403..4757422 (-)	1020	WP_221397904.1	UDP-N-acetylmuramate dehydrogenase	-
K3819_RS21480 (K3819_21480)	-	4757419..4757883 (-)	465	WP_064598568.1	low molecular weight protein-tyrosine-phosphatase	-
K3819_RS21485 (K3819_21485)	kdsB	4757883..4758647 (-)	765	WP_221397905.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
K3819_RS21490 (K3819_21490)	-	4758644..4758829 (-)	186	WP_003179363.1	Trm112 family protein	-
K3819_RS21495 (K3819_21495)	lpxK	4758854..4759864 (-)	1011	WP_221397906.1	tetraacyldisaccharide 4'-kinase	-
K3819_RS21500 (K3819_21500)	-	4759864..4760292 (-)	429	WP_039770694.1	biopolymer transporter ExbD	-
K3819_RS21505 (K3819_21505)	exbB	4760289..4760924 (-)	636	WP_163976130.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
K3819_RS21510 (K3819_21510)	comA	4761003..4763246 (-)	2244	WP_221397907.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
K3819_RS21515 (K3819_21515)	-	4763383..4763901 (+)	519	WP_085612113.1	DUF2062 domain-containing protein	-
K3819_RS21520 (K3819_21520)	-	4763956..4764735 (-)	780	WP_085612112.1	ABC transporter permease	-
K3819_RS21525 (K3819_21525)	-	4764732..4765664 (-)	933	WP_221397908.1	ABC transporter ATP-binding protein	-
K3819_RS21530 (K3819_21530)	-	4765798..4766421 (-)	624	WP_085612111.1	glutathione S-transferase family protein	-
K3819_RS21535 (K3819_21535)	-	4766465..4767124 (-)	660	WP_085612110.1	transglutaminase family protein	-

Sequence

Protein

• Length: 747 a.a.
• Molecular weight: 81706.79 Da
• Isoelectric Point: 10.0918

>NTDB_id=595601 K3819_RS21510 WP_221397907.1 4761003..4763246(-) (comA) [Pseudomonas sp. 3-2]
MRTGMMALAVGLLAAVFLPALPPVGLLLVLPWVALMLLPFRSYPLAFLLLGFAWAGFNAQLALNDRLPSRLDGETRWVEG
RVVGLPQSAEGVVRFELADARSRHDKLPSLMRLAWYAGPEVKSGERWRLAVKLKRPGGLLNPDAFDYEAWLLAQRIGATG
TVKDGQRLAPAQWAWRDSIRQRLLAVDAQDRNGALAALVLGDGSGLSREDWQILQDTGTVHLLVISGQHIGLLAALMYAL
VAGLARVGIWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVRRACVMVALVLLWRLRFRHLGAWWPLLLAFNGVLLMDPL
ASLRPGLWLSFAAVAVLIFTFGGRLGPWRWWQTWTRAQWLIAIGLCPVLLALSLPISLSGPLANLLAVPWVSFAVLPPAL
LGTLLLSIPHVGEGLLWLAGGLIDGLFRALALIAGRWPAWVAESMPGWIVALGCIGAVLLLLPRGVPLRPLGWPLLLVLA
FPPRERLAEGVADVWQLDVGQGLAILIRTRHHALLYDSGPRFGDFDVGERVVLPALHKLGVERLDLMLLSHADADHAGGA
LAVAKGLAVSRVISGDPPGLPEALNAEACESGRQWQWDGVAFHLWQWAEAHDSNQRSCVLQIEANGERLLLTGDIDSAAE
RDLLYSALAVPTQWLQAPHHGSRSSSSMALLKVLQPQAVLISRGQGNSFGHPHPTVIARYRKQGIHIHDSAEQGAIHLQL
GRFQPARSMRQQRRFWRAPPLPGTEYR

Nucleotide

• Length: 2244 bp

>NTDB_id=595601 K3819_RS21510 WP_221397907.1 4761003..4763246(-) (comA) [Pseudomonas sp. 3-2]
ATGCGCACAGGGATGATGGCGCTGGCGGTCGGTCTGCTGGCAGCGGTTTTTTTACCGGCCTTGCCGCCGGTCGGGTTATT
GCTGGTGTTGCCGTGGGTGGCGCTGATGCTGCTGCCGTTTCGCAGCTATCCACTGGCGTTTTTACTGCTTGGATTCGCAT
GGGCGGGATTCAACGCGCAACTGGCGTTGAATGATCGACTGCCGTCCCGGCTGGATGGCGAAACGCGCTGGGTGGAGGGC
CGGGTCGTCGGCTTGCCGCAGAGTGCCGAGGGCGTCGTGCGGTTTGAGCTGGCCGATGCGCGTTCGCGTCACGACAAACT
GCCATCGCTGATGCGTCTGGCCTGGTACGCCGGGCCCGAAGTCAAAAGTGGCGAACGCTGGCGATTGGCGGTCAAGCTCA
AGCGTCCCGGTGGCCTGCTCAATCCGGATGCGTTCGATTACGAGGCCTGGCTGCTGGCGCAACGCATCGGTGCTACCGGG
ACGGTGAAGGATGGCCAGCGTCTGGCGCCGGCGCAGTGGGCCTGGCGCGACAGTATTCGCCAGCGCCTGCTTGCCGTTGA
CGCCCAGGATCGTAACGGCGCCTTGGCCGCGTTGGTGCTCGGCGATGGTTCCGGCCTCAGTCGCGAAGACTGGCAGATCT
TGCAGGACACCGGCACCGTGCACCTGCTGGTGATTTCCGGTCAGCACATCGGGCTGTTGGCGGCGTTGATGTATGCGCTG
GTCGCCGGGCTGGCGCGGGTCGGGATCTGGCCGCTGCGTTGGCCCTGGCTGCCCTGGGCGTGCGGTCTGGCATTCGCGGC
GGCGCTGGGTTACGGCCTGCTGGCTGGATTCGATGTGCCGGTACGACGGGCCTGCGTGATGGTTGCGCTGGTGCTGTTGT
GGCGTTTGCGCTTTCGTCATCTCGGCGCATGGTGGCCGTTGCTGCTGGCCTTCAATGGCGTGTTGTTGATGGATCCGCTG
GCCAGCTTGCGTCCGGGGTTGTGGCTGTCTTTCGCGGCGGTGGCTGTGTTGATCTTCACCTTCGGCGGCCGTCTGGGGCC
GTGGCGCTGGTGGCAAACCTGGACGCGCGCGCAGTGGTTGATCGCGATCGGCCTGTGCCCGGTGCTGCTGGCGCTGAGTC
TGCCGATCAGTCTTAGCGGGCCGCTGGCCAATTTGCTGGCGGTGCCGTGGGTCAGTTTTGCGGTGCTGCCGCCGGCGTTG
CTCGGGACTTTGTTGCTGTCAATTCCTCATGTCGGCGAAGGGTTGCTGTGGCTGGCCGGCGGACTGATCGATGGATTGTT
CCGGGCGCTGGCCCTGATTGCCGGACGCTGGCCGGCGTGGGTTGCAGAATCGATGCCGGGCTGGATCGTGGCGCTGGGTT
GCATCGGTGCAGTGCTGTTATTGCTGCCTCGAGGCGTTCCTTTGCGCCCGCTGGGCTGGCCGTTGCTGCTGGTGCTGGCA
TTTCCGCCCCGGGAGCGACTGGCCGAAGGCGTGGCGGATGTCTGGCAGCTTGATGTTGGCCAAGGGCTGGCGATTCTGAT
CCGCACGCGCCATCACGCCTTGCTGTACGACAGCGGCCCGCGCTTCGGCGATTTCGATGTCGGCGAGCGGGTGGTGTTGC
CAGCCCTGCACAAGCTGGGCGTCGAGCGACTCGACCTGATGCTGCTCAGCCATGCCGATGCCGATCACGCGGGTGGTGCA
CTCGCCGTGGCGAAAGGACTGGCCGTCAGTCGGGTCATCAGTGGCGACCCGCCGGGTCTGCCCGAGGCGCTGAACGCCGA
GGCCTGTGAAAGCGGTCGGCAATGGCAGTGGGACGGCGTTGCCTTTCATCTATGGCAATGGGCAGAAGCCCACGACAGCA
ACCAGCGTTCCTGCGTGTTGCAGATCGAAGCCAACGGCGAGCGGTTGCTGCTGACCGGTGACATCGACAGCGCTGCCGAA
CGGGATTTGCTTTACAGCGCACTGGCGGTTCCGACCCAGTGGCTGCAAGCCCCGCACCATGGCAGCCGCAGTTCCTCATC
GATGGCCTTGCTCAAGGTTTTGCAGCCCCAGGCCGTGCTGATCTCCCGGGGGCAGGGCAACTCGTTCGGCCATCCACACC
CGACGGTCATCGCCCGCTACCGCAAACAGGGAATACACATCCACGACAGCGCCGAACAGGGCGCCATTCATCTGCAACTG
GGGCGGTTTCAGCCGGCCCGGTCGATGCGTCAACAACGCCGGTTCTGGCGCGCGCCGCCGTTGCCGGGGACGGAGTACCG
TTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.953	96.118	0.605
comA	Ralstonia pseudosolanacearum GMI1000	35.025	100	0.369