Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABEKA_RS09110 Genome accession   NZ_CP080636
Coordinates   1598190..1598573 (+) Length   127 a.a.
NCBI ID   WP_004280711.1    Uniprot ID   A0AAJ3AH21
Organism   Acinetobacter lwoffii strain EK30A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1593190..1603573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEKA_RS09100 (ABEKA_1610) - 1596077..1597204 (-) 1128 WP_004732003.1 efflux RND transporter periplasmic adaptor subunit -
  ABEKA_RS09105 (ABEKA_1611) - 1597256..1597903 (-) 648 WP_222110750.1 hypothetical protein -
  ABEKA_RS09110 (ABEKA_1612) pilG 1598190..1598573 (+) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  ABEKA_RS09115 (ABEKA_1613) - 1598599..1598967 (+) 369 WP_004731998.1 response regulator -
  ABEKA_RS09120 (ABEKA_1614) - 1598973..1599509 (+) 537 WP_004280709.1 chemotaxis protein CheW -
  ABEKA_RS09125 (ABEKA_1615) - 1599556..1601628 (+) 2073 Protein_1478 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14315.39 Da        Isoelectric Point: 4.7172

>NTDB_id=594625 ABEKA_RS09110 WP_004280711.1 1598190..1598573(+) (pilG) [Acinetobacter lwoffii strain EK30A]
MDDKFQNLKIMVIDDSKTIRRTAETLLQREGYEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=594625 ABEKA_RS09110 WP_004280711.1 1598190..1598573(+) (pilG) [Acinetobacter lwoffii strain EK30A]
ATGGACGATAAATTCCAAAATCTAAAAATTATGGTTATTGATGACTCAAAGACCATTCGTCGTACTGCGGAAACTCTTCT
TCAACGCGAAGGTTATGAGGTCATTACTGCAGTAGACGGTTTTGAGGCTTTGTCAAAAATTGCCGAAGCAAATCCAGATA
TCGTTTTTGTAGATATTATGATGCCGCGCCTAGATGGTTACCAAACCTGCGCCTTAATCAAAAACTCTCAGAATTACCAG
AATATTCCTGTGATTATGCTATCAAGTAAAGATGGCTTATTTGATCAGGCCAAAGGTCGTGTCGTGGGTTCAGATGAATA
CCTGACCAAACCTTTTAGTAAAGATGAATTGCTCAATGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

45.299

92.126

0.417
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362