Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   K3G18_RS19260 Genome accession   NZ_CP080629
Coordinates   3720824..3720943 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain YPS-32     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3715824..3725943
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K3G18_RS19240 (K3G18_19240) albG 3715988..3716689 (+) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  K3G18_RS19245 (K3G18_19245) ywhL 3716695..3718071 (-) 1377 WP_032722701.1 YncE family protein -
  K3G18_RS19250 (K3G18_19250) ywhK 3718110..3719465 (-) 1356 WP_032722703.1 YncE family protein -
  K3G18_RS21310 - 3719462..3719692 (-) 231 WP_009968328.1 hypothetical protein -
  K3G18_RS19255 (K3G18_19255) rapF 3719695..3720840 (+) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  K3G18_RS19260 (K3G18_19260) phrF 3720824..3720943 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  K3G18_RS19265 (K3G18_19265) - 3721057..3721507 (+) 451 Protein_3760 YbaK/EbsC family protein -
  K3G18_RS19270 (K3G18_19270) speB 3721539..3722411 (-) 873 WP_032722706.1 agmatinase -
  K3G18_RS19275 (K3G18_19275) speE 3722472..3723302 (-) 831 WP_003227543.1 spermidine synthase -
  K3G18_RS19280 (K3G18_19280) pbpG 3723504..3725579 (+) 2076 WP_003227540.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=594550 K3G18_RS19260 WP_009968329.1 3720824..3720943(+) (phrF) [Bacillus subtilis strain YPS-32]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=594550 K3G18_RS19260 WP_009968329.1 3720824..3720943(+) (phrF) [Bacillus subtilis strain YPS-32]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487