Detailed information NTG0594549

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: K3G18_RS19255
• Genome accession: NZ_CP080629
• Coordinates: 3719695..3720840 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YPS-32
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3714695..3725840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3G18_RS19235 (K3G18_19235)	albF	3714711..3715991 (+)	1281	WP_032722698.1	pitrilysin family protein	-
K3G18_RS19240 (K3G18_19240)	albG	3715988..3716689 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
K3G18_RS19245 (K3G18_19245)	ywhL	3716695..3718071 (-)	1377	WP_032722701.1	YncE family protein	-
K3G18_RS19250 (K3G18_19250)	ywhK	3718110..3719465 (-)	1356	WP_032722703.1	YncE family protein	-
K3G18_RS21310	-	3719462..3719692 (-)	231	WP_009968328.1	hypothetical protein	-
K3G18_RS19255 (K3G18_19255)	rapF	3719695..3720840 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
K3G18_RS19260 (K3G18_19260)	phrF	3720824..3720943 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
K3G18_RS19265 (K3G18_19265)	-	3721057..3721507 (+)	451	Protein_3760	YbaK/EbsC family protein	-
K3G18_RS19270 (K3G18_19270)	speB	3721539..3722411 (-)	873	WP_032722706.1	agmatinase	-
K3G18_RS19275 (K3G18_19275)	speE	3722472..3723302 (-)	831	WP_003227543.1	spermidine synthase	-
K3G18_RS19280 (K3G18_19280)	pbpG	3723504..3725579 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=594549 K3G18_RS19255 WP_003227549.1 3719695..3720840(+) (rapF) [Bacillus subtilis strain YPS-32]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=594549 K3G18_RS19255 WP_003227549.1 3719695..3720840(+) (rapF) [Bacillus subtilis strain YPS-32]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572