Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   ABVS_RS12735 Genome accession   NZ_CP080576
Coordinates   2663297..2664004 (+) Length   235 a.a.
NCBI ID   WP_004280141.1    Uniprot ID   A0A2K8USH5
Organism   Acinetobacter lwoffii strain VS15     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2658297..2669004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVS_RS12700 (ABVS_2653) - 2658564..2658980 (+) 417 WP_222112026.1 DUF6691 family protein -
  ABVS_RS12705 (ABVS_2654) - 2658983..2659855 (+) 873 WP_222112027.1 MBL fold metallo-hydrolase -
  ABVS_RS12710 - 2659961..2660703 (+) 743 Protein_2459 sulfite exporter TauE/SafE family protein -
  ABVS_RS12720 - 2660872..2661402 (-) 531 Protein_2460 transposase -
  ABVS_RS12725 (ABVS_2659) - 2661623..2662660 (+) 1038 WP_222112028.1 metallophosphoesterase -
  ABVS_RS12730 (ABVS_2660) - 2662727..2663149 (-) 423 WP_004280142.1 OsmC family protein -
  ABVS_RS12735 (ABVS_2661) crp 2663297..2664004 (+) 708 WP_004280141.1 cAMP-activated global transcriptional regulator CRP Regulator
  ABVS_RS12740 (ABVS_2662) - 2664178..2665227 (+) 1050 WP_222112029.1 NADP(H)-dependent aldo-keto reductase -
  ABVS_RS16745 (ABVS_2663) - 2665365..2665574 (+) 210 WP_005107328.1 antitoxin Xre-like helix-turn-helix domain-containing protein -
  ABVS_RS16815 - 2665600..2665722 (+) 123 WP_243474838.1 MbcA/ParS/Xre antitoxin family protein -
  ABVS_RS12750 (ABVS_2664) clpB 2665951..2668530 (+) 2580 WP_004280137.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26255.96 Da        Isoelectric Point: 4.7275

>NTDB_id=594207 ABVS_RS12735 WP_004280141.1 2663297..2664004(+) (crp) [Acinetobacter lwoffii strain VS15]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIIDAGSESKSLYLILKGSVSIILREDDDREIVVAYLNAGDF
FGEMGLFEVNPQRTAEVRTRDVCEIAEITYENFHEISKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEEASEAVADGAIDE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=594207 ABVS_RS12735 WP_004280141.1 2663297..2664004(+) (crp) [Acinetobacter lwoffii strain VS15]
ATGACTTCAAACTTTTCACAATTAAGCACTGATGCGCTTTCTCCGGGGCAATTACCAGAATCCGTGAAAGCACTGTTAAA
ACGTGCATATATTAATCGTTATCCAAAACGTACCACGATCATTGATGCAGGATCAGAATCTAAATCTTTATATTTAATTC
TGAAGGGGTCTGTATCTATCATTCTTCGTGAAGATGATGATCGTGAAATTGTCGTGGCTTATTTAAATGCGGGTGACTTC
TTTGGGGAAATGGGTCTATTCGAGGTTAATCCACAACGTACTGCGGAAGTTCGTACGCGTGATGTGTGTGAAATTGCCGA
AATTACCTATGAAAACTTTCACGAAATCAGCAAGCAATATCCTGATCTGAGCTATGCGGTATTTGCTCAATTAGTACGTC
GTTTGAAAAATACCACACGTAAAGTCACTGATCTGGCATTTATTGATGTTTCAGGCCGGATTGCACGTTGTCTGATCGAC
CTGTCTTCACAGCCAGAAGCGATGATTTTGCCGAATGGCCGTCAGATTCGTATTACCCGTCAGGAAATTGGTCGCATTGT
TGGCTGTTCCCGCGAAATGGTCGGACGTGTACTAAAAACCCTGGAAGAGCAGGGCATGATCGAAACCGATGGTAAAGCCA
TCCTGATCTTTGATGCTTCATTAGAAGAAGCATCTGAAGCAGTGGCAGATGGTGCCATAGACGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K8USH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

47.317

87.234

0.413
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4