Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABVS_RS03250 Genome accession   NZ_CP080576
Coordinates   660164..660547 (-) Length   127 a.a.
NCBI ID   WP_085064469.1    Uniprot ID   A0A6N1MFH7
Organism   Acinetobacter lwoffii strain VS15     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 655164..665547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVS_RS03235 (ABVS_0670) - 657109..659181 (-) 2073 WP_005106253.1 methyl-accepting chemotaxis protein -
  ABVS_RS03240 (ABVS_0671) - 659228..659764 (-) 537 WP_004280709.1 chemotaxis protein CheW -
  ABVS_RS03245 (ABVS_0672) - 659770..660138 (-) 369 WP_004280710.1 response regulator -
  ABVS_RS03250 (ABVS_0673) pilG 660164..660547 (-) 384 WP_085064469.1 twitching motility response regulator PilG Regulator
  ABVS_RS03255 (ABVS_0674) - 660834..661481 (+) 648 WP_005104054.1 hypothetical protein -
  ABVS_RS03260 (ABVS_0675) - 661533..662660 (+) 1128 WP_005104057.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14345.42 Da        Isoelectric Point: 4.7172

>NTDB_id=594178 ABVS_RS03250 WP_085064469.1 660164..660547(-) (pilG) [Acinetobacter lwoffii strain VS15]
MDDKFQNLKIMVIDDSKTIRRTAETLLQREGYEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHIST

Nucleotide


Download         Length: 384 bp        

>NTDB_id=594178 ABVS_RS03250 WP_085064469.1 660164..660547(-) (pilG) [Acinetobacter lwoffii strain VS15]
ATGGACGATAAATTCCAAAATCTAAAAATTATGGTTATTGATGACTCAAAGACCATTCGTCGTACTGCGGAAACTCTTCT
TCAACGCGAAGGTTATGAGGTCATTACTGCAGTAGACGGTTTTGAGGCTTTGTCAAAAATTGCCGAAGCAAATCCAGATA
TCGTTTTTGTAGATATTATGATGCCGCGCCTGGATGGTTATCAAACCTGCGCCTTAATCAAAAACTCTCAGAATTACCAG
AATATTCCTGTGATTATGCTATCGAGTAAAGATGGCTTATTTGATCAGGCCAAAGGTCGTGTCGTGGGTTCAGATGAATA
CCTGACTAAACCTTTTAGTAAAGATGAATTGCTCAATGCAATCCGTAACCATATTAGTACTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N1MFH7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

45.299

92.126

0.417
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362