Detailed information NTG0593608

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: K1Y48_RS02910
• Genome accession: NZ_CP080536
• Coordinates: 575898..576854 (-)
• Length: 318 a.a.
• NCBI ID: WP_226817483.1
• Uniprot ID: -
• Organism: Acidithiobacillus ferriphilus strain GT2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 570898..581854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K1Y48_RS02880 (K1Y48_02865)	hslV	571187..571726 (+)	540	WP_014028037.1	ATP-dependent protease subunit HslV	-
K1Y48_RS02885 (K1Y48_02870)	hslU	571729..573051 (+)	1323	WP_215860484.1	ATP-dependent protease ATPase subunit HslU	-
K1Y48_RS02890 (K1Y48_02875)	-	573073..573396 (-)	324	WP_229066453.1	hypothetical protein	-
K1Y48_RS02895 (K1Y48_02880)	rpoH	573402..574253 (-)	852	WP_215849237.1	RNA polymerase sigma factor RpoH	-
K1Y48_RS02900 (K1Y48_02885)	ftsX	574328..575233 (-)	906	WP_215849236.1	permease-like cell division protein FtsX	-
K1Y48_RS02905 (K1Y48_02890)	ftsE	575230..575901 (-)	672	WP_064219201.1	cell division ATP-binding protein FtsE	-
K1Y48_RS02910 (K1Y48_02895)	pilA	575898..576854 (-)	957	WP_226817483.1	signal recognition particle-docking protein FtsY	Machinery gene
K1Y48_RS02915 (K1Y48_02900)	rsmD	577085..577654 (+)	570	WP_215849234.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
K1Y48_RS02920 (K1Y48_02905)	coaD	577647..578171 (+)	525	WP_064219204.1	pantetheine-phosphate adenylyltransferase	-
K1Y48_RS02925 (K1Y48_02910)	-	578201..578452 (+)	252	WP_064219205.1	YfhL family 4Fe-4S dicluster ferredoxin	-
K1Y48_RS02930 (K1Y48_02915)	-	578436..580415 (-)	1980	WP_215849233.1	dynamin family protein	-
K1Y48_RS02935 (K1Y48_02920)	mutM	580432..581244 (-)	813	WP_215849232.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-

Sequence

Protein

• Length: 318 a.a.
• Molecular weight: 34210.24 Da
• Isoelectric Point: 7.4268

>NTDB_id=593608 K1Y48_RS02910 WP_226817483.1 575898..576854(-) (pilA) [Acidithiobacillus ferriphilus strain GT2]
MPTEALSDTPGKGLFSRLRQGLTRSREQLVEGVGRLVRGKKVIDAELLEDLEALLLQADLGTAATREIMDSVAERVHRKE
LTDPNALQTALRESLLDILRPRAQPWSPEKGRSQVLLMVGINGAGKTTTIGKLAAHWRAEGFGIVLAAGDTFRAAAVEQL
QGWGKRVQVPVVAQGTGADSASVIFDALTTTRARGSELLIADTAGRLHTQGHLMEELKKIKRVLGKQDPEAPQQIWLVLD
AGTGQNALNQVRQFHDAIGLTGICITKLDGTAKGGVVAAIARAVPIPIRYIGVGEQVEDLRPFDPESFVDALFAESKS

Nucleotide

• Length: 957 bp

>NTDB_id=593608 K1Y48_RS02910 WP_226817483.1 575898..576854(-) (pilA) [Acidithiobacillus ferriphilus strain GT2]
ATGCCGACAGAAGCCCTTTCCGATACACCCGGAAAAGGGCTTTTCTCCCGTCTTCGACAAGGCCTGACCCGAAGCCGGGA
ACAATTGGTCGAGGGCGTGGGGCGTCTGGTACGCGGTAAAAAGGTTATTGATGCGGAATTGCTGGAAGACCTGGAAGCCT
TACTGCTGCAAGCTGATCTGGGCACGGCTGCAACCCGGGAAATCATGGACAGCGTGGCGGAGCGGGTACATCGCAAGGAA
CTCACGGACCCCAACGCGCTCCAGACGGCGTTGCGCGAGTCACTCCTCGACATCCTGCGTCCCCGCGCGCAACCTTGGTC
GCCCGAGAAGGGGCGCTCCCAGGTATTGCTCATGGTGGGTATCAACGGCGCGGGTAAAACGACCACCATCGGTAAGCTGG
CTGCGCACTGGAGGGCGGAGGGCTTCGGTATTGTCCTCGCCGCCGGAGACACCTTCCGCGCCGCCGCCGTGGAGCAGTTA
CAGGGCTGGGGTAAACGGGTGCAGGTGCCCGTGGTGGCGCAGGGGACGGGCGCCGACAGCGCTTCCGTGATCTTTGATGC
GCTGACTACGACCCGCGCGCGCGGCAGCGAGTTGCTCATCGCCGATACCGCCGGACGCCTTCATACCCAGGGTCATCTCA
TGGAAGAATTGAAGAAGATCAAGCGGGTCCTTGGCAAACAGGACCCGGAGGCGCCACAACAGATCTGGCTGGTGCTGGAC
GCGGGCACCGGCCAGAATGCCCTTAATCAGGTGCGTCAGTTTCACGATGCGATAGGGTTGACGGGTATTTGCATCACCAA
GCTGGATGGCACCGCCAAAGGTGGCGTGGTGGCGGCCATTGCCAGGGCCGTGCCCATTCCCATTCGCTATATCGGTGTTG
GTGAGCAGGTCGAAGATCTACGTCCTTTTGACCCCGAATCTTTTGTCGATGCCCTTTTTGCGGAGTCGAAGTCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-95)

• SRP54-type protein, GTPase domain (SRP54) (114-313)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.974	94.969	0.513