Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   K0V03_RS05440 Genome accession   NZ_CP080508
Coordinates   976003..978300 (-) Length   765 a.a.
NCBI ID   WP_085185942.1    Uniprot ID   -
Organism   Bacillus subtilis strain HD15     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 971003..983300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS05400 (K0V03_05400) mrpB 971470..971901 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  K0V03_RS05405 (K0V03_05405) mrpC 971901..972242 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  K0V03_RS05410 (K0V03_05410) mrpD 972235..973716 (+) 1482 WP_085185944.1 Na+/H+ antiporter subunit D -
  K0V03_RS05415 (K0V03_05415) mrpE 973722..974198 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  K0V03_RS05420 (K0V03_05420) mrpF 974198..974482 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  K0V03_RS05425 (K0V03_05425) mnhG 974466..974840 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  K0V03_RS05430 (K0V03_05430) yuxO 974879..975259 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  K0V03_RS05435 (K0V03_05435) comA 975278..975922 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  K0V03_RS05440 (K0V03_05440) comP 976003..978300 (-) 2298 WP_085185942.1 histidine kinase Regulator
  K0V03_RS05445 (K0V03_05445) comX 978308..978469 (-) 162 WP_003241045.1 competence pheromone ComX -
  K0V03_RS05450 (K0V03_05450) - 978484..979344 (-) 861 WP_032677058.1 polyprenyl synthetase family protein -
  K0V03_RS05455 (K0V03_05455) degQ 979529..979669 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  K0V03_RS05460 (K0V03_05460) - 979891..980016 (+) 126 WP_120028613.1 hypothetical protein -
  K0V03_RS05465 (K0V03_05465) - 980131..980499 (+) 369 WP_038828672.1 hypothetical protein -
  K0V03_RS05470 (K0V03_05470) pdeH 980475..981704 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88452.87 Da        Isoelectric Point: 7.9091

>NTDB_id=593305 K0V03_RS05440 WP_085185942.1 976003..978300(-) (comP) [Bacillus subtilis strain HD15]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDIVKRINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFIIKINESKDLPSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVGIYFCIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGNIKLYDAENVNSFEKVYEKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVMLCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=593305 K0V03_RS05440 WP_085185942.1 976003..978300(-) (comP) [Bacillus subtilis strain HD15]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACCTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGAGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGTGGAATAGAAAAAGGGGATATCGTAAAGCGTATTAATAATCAAAAGATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTGAGCTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACTTTATT
TAATGATAAAAATTTTTCTACTTACTTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATAATAA
AAATAAATGAATCAAAGGATTTACCATCTGCTTTAGTTTTAATTATATTTCTGTTATCCGCTTCTATTGCTTATATAAGT
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTACCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTGGTACCGA
TCATAAATGTAGTGTGTGAAATGTTCCGTTCACACCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCCTTT
TTCTTTTTATTTATCATAGTAGGGATATATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAGGTTCTCACTATTATTAATATCTTTTCTTTCTCACCTTTTTTGTGTTTATATTTGATACCGTATGTCTTTTTAAATG
CGCACTATGTTTCATCCTTTTTAGCAGCTTCATTTATGATGCTAATACCTTTCTCCTTAGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTGATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTGTCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAATATTAAACTATATGATGCTGAGAACG
TAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAGATAGGGAAAATCGTTGAATTTAATAAA
GGTTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATGCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAA
GAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTTAAGAAGGATGACAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTC
AAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTTGAT
CAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.197

100

0.597