Detailed information NTG0059200

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PCA10_RS10610
• Genome accession: NC_021499
• Coordinates: 2342760..2344985 (+)
• Length: 741 a.a.
• NCBI ID: WP_041770628.1
• Uniprot ID: -
• Organism: Metapseudomonas resinovorans NBRC 106553
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2337760..2349985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCA10_RS10580 (PCA10_21370)	-	2337784..2338074 (-)	291	WP_016492069.1	hypothetical protein	-
PCA10_RS10585 (PCA10_21380)	-	2338084..2338668 (-)	585	WP_041770627.1	PilZ domain-containing protein	-
PCA10_RS10590 (PCA10_21390)	-	2338837..2340087 (+)	1251	WP_016492071.1	lipoprotein-releasing ABC transporter permease subunit	-
PCA10_RS10595 (PCA10_21400)	lolD	2340080..2340763 (+)	684	WP_016492072.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PCA10_RS10600 (PCA10_21410)	-	2340765..2342009 (+)	1245	WP_016492073.1	lipoprotein-releasing ABC transporter permease subunit	-
PCA10_RS10605 (PCA10_21420)	-	2342061..2342588 (-)	528	WP_016492074.1	DUF2062 domain-containing protein	-
PCA10_RS10610 (PCA10_21430)	comA	2342760..2344985 (+)	2226	WP_041770628.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PCA10_RS10615 (PCA10_21440)	-	2345058..2345693 (+)	636	WP_016492076.1	MotA/TolQ/ExbB proton channel family protein	-
PCA10_RS10620 (PCA10_21450)	-	2345690..2346136 (+)	447	WP_016492077.1	biopolymer transporter ExbD	-
PCA10_RS10625 (PCA10_21460)	lpxK	2346136..2347140 (+)	1005	WP_016492078.1	tetraacyldisaccharide 4'-kinase	-
PCA10_RS10630 (PCA10_21470)	-	2347181..2347366 (+)	186	WP_016492079.1	Trm112 family protein	-
PCA10_RS10635 (PCA10_21480)	kdsB	2347363..2348127 (+)	765	WP_016492080.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PCA10_RS10640 (PCA10_21490)	-	2348127..2348591 (+)	465	WP_016492081.1	low molecular weight protein-tyrosine-phosphatase	-
PCA10_RS10645 (PCA10_21500)	murB	2348588..2349607 (+)	1020	WP_016492082.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79753.98 Da
• Isoelectric Point: 9.5054

>NTDB_id=59200 PCA10_RS10610 WP_041770628.1 2342760..2344985(+) (comA) [Metapseudomonas resinovorans NBRC 106553]
MLSGLAALAAGLLMLRWMPGLPPLWWLYLQLVLGLLLLGSRAWRLGLFALGLGWACLSAQWALDDRLAPGLDGQVRWLEG
RVVGLPASAEGVVRFELEDIHADRAHLPGRLRLSWHQGPPVLAGERWRLAVSLKRPRGLVNPATFDYEAWLLARRIGATG
SVKAGERLQAAEGPVAWREALRQRLLAVDAQGRAGGLAALVLGDGSGLRDADWQLLRDTGTTHLMVISGQHITLFAGVLY
GLVALLARFGLWPRRLPWLPWACTLAFAGGLGYGLLAGFEVPVQRACVMLAVVLLWRVRFRHLGVLTPLLAALCVVLLAE
PLVVLQPGFWLSFGAVALLVLAFAGRLGAWPWWLTWWRAQWVMGLGLAPLLMALALPISFSGPLANLLAVPWISLLVLPL
ALLGTLLLGVPLLGEALLWLAGGALELLFLVLAWIALQLPAWIPAQIPFWAWGLGALGALLLIAPAGLPVRALGLALLLP
MLFPPLDRPAHGEAEVRVLDVGQGLSVLVRTREHALLYDAGLRRGDFDLGERVVVPTLRGLGVSRLDLMLISHGDADHAG
GAMAVGRGLAVKRVLSGEPERLPVVLGAERCSAGEAWRWDGVDFRIWQPPPGGDSNDSSCVLAVQAGGERLLLAGDLSAR
GEAAWIASGQPLAARWLVAGHHGSRTSSSSFFLRAVAPEKVLISRGHLNAYGHPHPLVVSRIEALPAGLHDTAVEGQLLL
QLGRGGEPESEREKSVFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=59200 PCA10_RS10610 WP_041770628.1 2342760..2344985(+) (comA) [Metapseudomonas resinovorans NBRC 106553]
ATGCTCTCGGGCCTGGCCGCACTCGCCGCCGGGCTGCTCATGCTGCGCTGGATGCCCGGCTTGCCACCGCTCTGGTGGCT
CTACCTGCAACTCGTTCTCGGCTTATTGCTGCTGGGCTCCCGCGCCTGGCGCCTGGGGCTCTTCGCGCTCGGTCTCGGCT
GGGCGTGCCTGAGTGCCCAGTGGGCCCTGGATGATCGGCTGGCGCCCGGGCTCGACGGTCAGGTGCGCTGGTTGGAGGGG
AGGGTGGTGGGTTTGCCCGCCAGCGCCGAGGGCGTGGTGCGCTTCGAGCTGGAGGATATCCACGCCGATCGGGCGCACCT
GCCCGGGCGCTTGCGCCTGTCGTGGCACCAGGGGCCACCTGTGCTGGCCGGGGAGCGCTGGCGCCTGGCGGTAAGCCTCA
AGCGGCCGCGCGGCCTGGTGAATCCGGCGACCTTCGACTACGAGGCCTGGTTGCTGGCCCGGCGCATCGGCGCCACCGGC
TCGGTGAAAGCAGGCGAGCGCCTGCAGGCGGCGGAGGGCCCCGTTGCCTGGCGTGAAGCCCTGCGCCAGCGTCTGCTGGC
GGTGGATGCGCAGGGTCGCGCCGGCGGACTCGCCGCGCTGGTGCTGGGAGATGGTTCCGGCCTCCGGGACGCGGACTGGC
AATTGTTGCGGGATACCGGCACCACCCACCTGATGGTGATTTCCGGCCAGCACATCACACTGTTCGCCGGCGTCCTCTAT
GGGCTGGTGGCGCTGCTGGCGCGTTTCGGTCTTTGGCCGAGGCGCCTGCCCTGGTTGCCCTGGGCCTGCACCCTGGCCTT
CGCCGGCGGGCTCGGCTATGGCCTGTTGGCCGGCTTTGAAGTGCCGGTGCAACGGGCCTGCGTGATGTTGGCCGTGGTCC
TGCTCTGGCGCGTGCGCTTTCGTCACCTCGGGGTCCTGACCCCCTTGCTGGCCGCTCTCTGCGTGGTACTGCTGGCCGAA
CCCCTGGTGGTGTTGCAGCCGGGTTTCTGGTTGTCCTTCGGCGCGGTGGCGCTGCTGGTGCTGGCCTTCGCCGGACGCCT
CGGGGCCTGGCCCTGGTGGCTGACCTGGTGGCGTGCCCAGTGGGTGATGGGGCTGGGCCTGGCGCCCCTGTTGATGGCGC
TGGCCCTGCCCATCAGTTTCAGCGGCCCGCTGGCCAACCTGCTGGCGGTGCCCTGGATCAGCCTGCTGGTACTGCCCCTG
GCATTGCTGGGAACCCTGTTGCTGGGCGTGCCATTGCTCGGCGAGGCGCTGCTCTGGCTGGCCGGCGGTGCGCTGGAGCT
GCTGTTCCTGGTGCTGGCCTGGATCGCCCTGCAGCTACCAGCCTGGATACCAGCGCAGATCCCCTTCTGGGCCTGGGGGC
TGGGCGCGCTTGGTGCGCTGCTGTTGATCGCGCCGGCCGGCCTGCCCGTGCGCGCGCTTGGCCTGGCGCTGCTGCTGCCG
ATGCTGTTTCCGCCCCTGGACCGTCCGGCCCACGGTGAAGCCGAGGTACGGGTGCTGGACGTGGGGCAGGGGCTCTCGGT
GCTGGTGCGAACTCGCGAGCATGCGCTGCTCTACGATGCCGGTCTGCGCCGGGGCGACTTCGATCTCGGCGAGCGGGTGG
TGGTGCCGACCCTGCGTGGCCTCGGGGTGAGCCGGCTGGACCTGATGCTGATCAGCCATGGCGACGCCGACCATGCCGGT
GGCGCCATGGCCGTGGGGCGAGGGCTGGCGGTGAAGCGGGTGCTCAGCGGCGAGCCGGAGCGCCTGCCGGTCGTGCTGGG
CGCCGAGCGCTGTTCGGCGGGGGAGGCCTGGCGTTGGGATGGGGTGGACTTCCGGATCTGGCAGCCGCCGCCGGGCGGCG
ACAGCAACGACAGTTCCTGCGTCCTGGCGGTCCAGGCCGGCGGCGAGCGGCTGTTGCTCGCCGGCGATCTCAGCGCCCGT
GGCGAGGCGGCCTGGATCGCCAGCGGCCAGCCCCTGGCGGCACGCTGGCTTGTGGCCGGCCACCATGGCAGCCGGACATC
CTCCAGCAGCTTCTTCCTGCGTGCCGTGGCACCGGAGAAGGTGTTGATCTCCCGAGGCCACTTGAACGCCTACGGTCATC
CGCATCCGTTGGTCGTCTCGCGCATAGAGGCTTTGCCAGCTGGGCTCCATGACACGGCGGTGGAGGGGCAGTTGCTGCTG
CAGCTGGGGCGCGGAGGCGAGCCTGAGTCCGAGCGGGAAAAGTCTGTGTTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-464)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-687)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.5	97.166	0.607
comA	Ralstonia pseudosolanacearum GMI1000	38.587	99.325	0.383