Detailed information NTG0591944

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: KZ795_RS16010
• Genome accession: NZ_CP080286
• Coordinates: 3464053..3466278 (+)
• Length: 741 a.a.
• NCBI ID: WP_121348269.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain UNC_PaerCF12
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3459053..3471278

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZ795_RS15985 (KZ795_15985)	-	3459360..3459959 (-)	600	WP_033975956.1	PilZ domain-containing protein	-
KZ795_RS15990 (KZ795_15990)	-	3460062..3461312 (+)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
KZ795_RS15995 (KZ795_15995)	lolD	3461305..3461988 (+)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
KZ795_RS16000 (KZ795_16000)	-	3462058..3463302 (+)	1245	WP_033975958.1	lipoprotein-releasing ABC transporter permease subunit	-
KZ795_RS16005 (KZ795_16005)	-	3463389..3463922 (-)	534	WP_003091165.1	DUF2062 domain-containing protein	-
KZ795_RS16010 (KZ795_16010)	comA	3464053..3466278 (+)	2226	WP_121348269.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KZ795_RS16015 (KZ795_16015)	exbB	3466351..3466986 (+)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
KZ795_RS16020 (KZ795_16020)	-	3466983..3467423 (+)	441	WP_003091161.1	biopolymer transporter ExbD	-
KZ795_RS16025 (KZ795_16025)	lpxK	3467423..3468421 (+)	999	WP_121348270.1	tetraacyldisaccharide 4'-kinase	-
KZ795_RS16030 (KZ795_16030)	-	3468459..3468644 (+)	186	WP_003091157.1	Trm112 family protein	-
KZ795_RS16035 (KZ795_16035)	kdsB	3468644..3469408 (+)	765	WP_121348271.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KZ795_RS16040 (KZ795_16040)	-	3469408..3469872 (+)	465	WP_033968891.1	low molecular weight protein-tyrosine-phosphatase	-
KZ795_RS16045 (KZ795_16045)	murB	3469869..3470888 (+)	1020	WP_121348272.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80024.65 Da
• Isoelectric Point: 10.5155

>NTDB_id=591944 KZ795_RS16010 WP_121348269.1 3464053..3466278(+) (comA) [Pseudomonas aeruginosa strain UNC_PaerCF12]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGITRFRLEEVSGARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLGQRVGAV
GTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLGTLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLSEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHALLYDSGARQGALDMGERVVVPVLRSLDLRRLDGLLLSHADNDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERRWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGELLLLTGDMSRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGSARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=591944 KZ795_RS16010 WP_121348269.1 3464053..3466278(+) (comA) [Pseudomonas aeruginosa strain UNC_PaerCF12]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGCTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCATCACGCGCTTCCGGCTGGAGGAGGTCAGTGGCGCGCGGGGCGTCCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGTGGTGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCTCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAAGCCTGGTTGTTGGGGCAGCGGGTCGGTGCCGTT
GGAACGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGTGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTCCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCTGGATTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGCTTCGAGGTCCCGGTGCGGCGTGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGCCACCTGGGCTTGCTGACCCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGTGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTGCTGGCGGTACCTTGGATCGAACTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTACCCGGGCTGAGCGAGGGGCTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGCTACTG
CCGGCGTTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCGCTCGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGCAGCCTGGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGTCATGCCGACAACGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGTGACGAGCGGCGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAACTCCTGCTGCTGACCGGGGACATGTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCACCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCAGTGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.53	97.301	0.57
comA	Ralstonia pseudosolanacearum GMI1000	35.742	100	0.367