Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   LPB404_RS07695 Genome accession   NZ_CP079821
Coordinates   1523777..1524781 (-) Length   334 a.a.
NCBI ID   WP_006595886.1    Uniprot ID   A0A127TTE3
Organism   Streptococcus rubneri strain LPB0404     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1518777..1529781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPB404_RS07680 (LPB404_07680) thrS 1519032..1520975 (-) 1944 WP_023023925.1 threonine--tRNA ligase -
  LPB404_RS07685 (LPB404_07685) - 1521359..1522681 (-) 1323 WP_219074527.1 glycosyltransferase family 4 protein -
  LPB404_RS07690 (LPB404_07690) - 1522683..1523681 (-) 999 WP_219074528.1 glycosyltransferase family 4 protein -
  LPB404_RS07695 (LPB404_07695) ccpA 1523777..1524781 (-) 1005 WP_006595886.1 catabolite control protein A Regulator
  LPB404_RS07700 (LPB404_07700) - 1524942..1526023 (+) 1082 Protein_1474 M24 family metallopeptidase -
  LPB404_RS07705 (LPB404_07705) - 1526048..1526386 (+) 339 WP_219074529.1 cytochrome O ubiquinol oxidase -
  LPB404_RS07710 (LPB404_07710) - 1526483..1526932 (-) 450 WP_048789598.1 Rrf2 family transcriptional regulator -
  LPB404_RS07715 (LPB404_07715) - 1527076..1527918 (-) 843 WP_219074530.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37005.12 Da        Isoelectric Point: 6.6646

>NTDB_id=589772 LPB404_RS07695 WP_006595886.1 1523777..1524781(-) (ccpA) [Streptococcus rubneri strain LPB0404]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTLLAKRNKKIAFVSGPLVDDINGKIRLAGYKDALKAKKLSYSEGLVFESKYRYEEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLADQGVNVPEDFELITSDDSQITRYTRPNLSTVGQPLYDLGAISMRMLTKIMHKEELEEREV
LLAHTINHRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=589772 LPB404_RS07695 WP_006595886.1 1523777..1524781(-) (ccpA) [Streptococcus rubneri strain LPB0404]
ATGAATACAGACGATACTGTAACCATTTACGACGTTGCCCGAGAGGCGGGTGTCTCAATGGCGACTGTTAGCCGTGTCGT
GAACGGAAATAAGAACGTTAAGGAAAATACTCGTAAAAAAGTATTGGAAGTCATTGAACGTTTGGACTATCGTCCGAATG
CAGTAGCTCGTGGACTTGCGAGTAAGAAAACCACAACGGTAGGTGTTGTGATTCCAAATATTACCAATAGTTATTTCTCT
ACTCTGGCAAAGGGGATCGATGACATTGCTGAAATGTACAAGTACAACATCGTCCTTGCCAACAGCGATGAAGACGATGA
TAAAGAAGTTTCTGTTGTCAATACTCTTTTCTCAAAACAGGTCGATGGGATTATCTTCATGGGTTATCACTTGACAGAAA
AGATTCGTTCAGAATTCTCTCGTTCTCGGACACCGGTGGTCCTTGCTGGGACAGTTGATGTCGAACATCAATTGCCAAGT
GTCAATATCGATTACAAGCAAGCGACAGTAGACGCGGTTACACTATTGGCTAAACGAAATAAAAAGATTGCTTTTGTAAG
TGGACCATTAGTAGATGATATCAACGGTAAGATTCGCTTGGCTGGCTACAAAGATGCTTTGAAAGCAAAAAAATTGTCTT
ACAGTGAAGGCTTGGTCTTTGAGTCTAAGTACCGCTATGAAGAAGGCTATAACTTGGCTGAACGCATCATTGCATCTAAA
GCAACAGCAGCCTTTGTAACTGGGGATGAATTGGCAGCAGGTTTGCTTAATGGTCTAGCTGATCAAGGTGTGAACGTACC
GGAAGATTTTGAGTTGATTACCAGTGATGATTCACAAATTACACGCTACACTCGTCCAAATCTTTCAACTGTTGGCCAAC
CACTTTATGATTTGGGGGCTATCAGTATGCGGATGCTGACAAAAATTATGCATAAGGAAGAATTGGAAGAAAGAGAAGTT
CTTCTTGCCCATACCATCAATCATCGTGGGACTACGAAGAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A127TTE3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.018

100

0.91
  ccpA Streptococcus pneumoniae D39

85.03

100

0.85
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.1

99.102

0.566