Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   EGT72_RS05325 Genome accession   NZ_CP079792
Coordinates   1094909..1095616 (-) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter johnsonii strain AJ_082     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1089909..1100616
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT72_RS05305 (EGT72_005305) - 1090705..1092024 (+) 1320 WP_004696178.1 adenylosuccinate synthase -
  EGT72_RS05310 (EGT72_005310) - 1092225..1092530 (+) 306 WP_125281302.1 hypothetical protein -
  EGT72_RS05315 (EGT72_005315) - 1092717..1093490 (+) 774 WP_125281301.1 M48 family metallopeptidase -
  EGT72_RS05320 (EGT72_005320) - 1093671..1094720 (-) 1050 WP_125281300.1 NADP(H)-dependent aldo-keto reductase -
  EGT72_RS05325 (EGT72_005325) crp 1094909..1095616 (-) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  EGT72_RS05330 (EGT72_005330) - 1095764..1096186 (+) 423 WP_125281299.1 OsmC family protein -
  EGT72_RS05335 (EGT72_005335) clpB 1096577..1099156 (+) 2580 WP_125281298.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=589513 EGT72_RS05325 WP_004696183.1 1094909..1095616(-) (crp) [Acinetobacter johnsonii strain AJ_082]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=589513 EGT72_RS05325 WP_004696183.1 1094909..1095616(-) (crp) [Acinetobacter johnsonii strain AJ_082]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGGGAAATGGGGCTATTCGAAGCAAACTCACAACGTACTGCTGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTGACTTATGAAAACTTCCATGAACTCAGCAAACAATACCCTGACCTGAGCTATGCAGTATTTGCACAGCTGGTACGCC
GTCTAAAAAATACCACTCGTAAAGTAACTGACCTTGCATTTATCGATGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
CTATCTTCGCAACCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACGCGTCAAGAGATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTAAAAACACTCGAAGAGCAGGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4