Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   EGT72_RS02730 Genome accession   NZ_CP079792
Coordinates   571402..571800 (+) Length   132 a.a.
NCBI ID   WP_114836792.1    Uniprot ID   A0A7H8SDP5
Organism   Acinetobacter johnsonii strain AJ_082     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 566402..576800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT72_RS02715 (EGT72_002715) - 567389..569695 (+) 2307 WP_125280934.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  EGT72_RS02720 (EGT72_002720) - 569736..570503 (-) 768 WP_125280935.1 SDR family oxidoreductase -
  EGT72_RS02725 (EGT72_002725) mazG 570622..571383 (+) 762 WP_125280936.1 nucleoside triphosphate pyrophosphohydrolase -
  EGT72_RS02730 (EGT72_002730) comEA 571402..571800 (+) 399 WP_114836792.1 ComEA family DNA-binding protein Machinery gene
  EGT72_RS02735 (EGT72_002735) pcnB 571938..573407 (+) 1470 WP_114836793.1 polynucleotide adenylyltransferase PcnB -
  EGT72_RS02740 (EGT72_002740) folK 573404..573892 (+) 489 WP_125280937.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  EGT72_RS02745 (EGT72_002745) panB 573929..574738 (+) 810 WP_125280938.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  EGT72_RS02750 (EGT72_002750) panC 574742..575584 (+) 843 WP_125280939.1 pantoate--beta-alanine ligase -
  EGT72_RS02755 (EGT72_002755) rapZ 575611..576462 (+) 852 WP_125280940.1 RNase adapter RapZ -
  EGT72_RS02760 (EGT72_002760) - 576459..576728 (+) 270 WP_010325935.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14651.16 Da        Isoelectric Point: 10.8498

>NTDB_id=589511 EGT72_RS02730 WP_114836792.1 571402..571800(+) (comEA) [Acinetobacter johnsonii strain AJ_082]
MIKIKVSLLIIALLLLSLLAWVPSSYAQSFDQNYLNWKAEQQAWDDRIQAPKSVKRAVSPVQAQPVLSANKISLNQASVD
QLQQLQGVGLKKAQAIVAYRQKQGPFKTIDELQQVRGIGPAIFAKNKTRLGL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=589511 EGT72_RS02730 WP_114836792.1 571402..571800(+) (comEA) [Acinetobacter johnsonii strain AJ_082]
TTGATAAAAATAAAAGTAAGTTTGTTGATCATTGCGTTGTTATTACTGAGTCTACTGGCTTGGGTACCCAGTAGTTATGC
GCAGTCGTTTGATCAGAACTATCTGAACTGGAAAGCAGAGCAGCAGGCCTGGGATGATCGTATTCAAGCGCCAAAGAGCG
TGAAACGTGCTGTGTCTCCTGTTCAGGCCCAACCTGTGTTGAGTGCAAATAAAATTAGTTTAAATCAAGCCAGTGTCGAT
CAGTTACAGCAGCTTCAGGGTGTGGGTCTAAAAAAGGCACAGGCAATCGTGGCCTATCGCCAGAAACAAGGGCCATTTAA
GACCATAGATGAGCTACAACAGGTGCGCGGGATTGGACCGGCAATTTTTGCAAAAAATAAAACCCGTTTGGGCTTGTGA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(69-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SDP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

53.279

92.424

0.492
  comEA Acinetobacter baumannii D1279779

50.806

93.939

0.477
  comEA Acinetobacter baylyi ADP1

44.86

81.061

0.364