Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   KX728_RS01105 Genome accession   NZ_CP079724
Coordinates   207826..208836 (+) Length   336 a.a.
NCBI ID   WP_215805080.1    Uniprot ID   -
Organism   Streptococcus oralis strain 34     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 202826..213836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KX728_RS01080 (KX728_01080) - 203140..204462 (+) 1323 WP_215805084.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  KX728_RS01085 (KX728_01085) folE 204443..204997 (+) 555 WP_000380931.1 GTP cyclohydrolase I FolE -
  KX728_RS01090 (KX728_01090) folK 205156..205977 (+) 822 WP_215805083.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  KX728_RS01095 (KX728_01095) - 205970..207253 (+) 1284 WP_215805082.1 DUF308 domain-containing protein -
  KX728_RS01100 (KX728_01100) - 207304..207621 (-) 318 WP_215805081.1 DUF960 domain-containing protein -
  KX728_RS01105 (KX728_01105) ccpA 207826..208836 (+) 1011 WP_215805080.1 catabolite control protein A Regulator
  KX728_RS01110 (KX728_01110) - 208889..209851 (-) 963 WP_061426607.1 asparaginase -
  KX728_RS01115 (KX728_01115) - 209917..211302 (+) 1386 WP_219108650.1 Cof-type HAD-IIB family hydrolase -
  KX728_RS01120 (KX728_01120) - 211339..211791 (-) 453 WP_000079162.1 universal stress protein -
  KX728_RS01125 (KX728_01125) - 211965..212264 (+) 300 WP_215805078.1 hypothetical protein -
  KX728_RS01130 (KX728_01130) - 212408..213622 (+) 1215 WP_049490443.1 pyridoxal phosphate-dependent aminotransferase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37262.32 Da        Isoelectric Point: 5.7391

>NTDB_id=588957 KX728_RS01105 WP_215805080.1 207826..208836(+) (ccpA) [Streptococcus oralis strain 34]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDYIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLLKENEKIAFVSGPLVDDINGKVRLIGYKEALKKAGHSYSEGLVFESKYSYDDGYALAERLISSQ
ATAAVVTGDELAAGVLNGLADHGVSVPEEFEIITTDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=588957 KX728_RS01105 WP_215805080.1 207826..208836(+) (ccpA) [Streptococcus oralis strain 34]
ATGAACACAGATGATACAGTAACGATTTATGACGTCGCCCGTGAAGCAGGAGTTTCAATGGCAACAGTTAGCCGTGTCGT
TAATGGCAACAAGAATGTTAAAGAGAACACTCGAAAAAAAGTCCTAGAAGTGATTGATCGCTTGGACTATCGTCCAAATG
CGGTAGCACGTGGTTTGGCTAGCAAGAAAACAACGACAGTCGGAGTTGTGATTCCGAACATTACCAATGGTTATTTCTCA
ACACTTGCTAAGGGAATTGACTACATTGCTGAAATGTACAAGTATAACATTGTCCTTGCAAATAGTGATGAGGATGATGA
AAAGGAAGTTTCAGTAGTCAACACTCTCTTTTCAAAACAAGTCGATGGGATTATCTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAGTTTTCTCGTTCACGGACACCGGTTGTTCTTGCTGGTACTGTGGATGTCGAACACCAACTTCCAAGT
GTGAATATCGACTACAAACAAGCAACGATTGATGCTGTGAGTTACCTTCTCAAAGAAAATGAGAAAATTGCTTTTGTGAG
TGGACCACTCGTCGATGATATCAATGGCAAGGTTCGTTTGATCGGTTACAAGGAAGCCTTGAAAAAAGCTGGACATTCTT
ATAGTGAGGGCTTGGTCTTTGAATCAAAATACAGCTATGATGATGGCTATGCCTTGGCAGAACGCTTGATTTCATCACAA
GCTACAGCCGCAGTTGTAACAGGTGATGAATTGGCGGCAGGTGTGTTGAATGGTTTGGCTGACCATGGCGTATCTGTGCC
AGAAGAGTTTGAAATCATCACGACAGATGACTCTCAGATTGCACGATTCACTCGTCCAAACTTGACTACTATTGCCCAAC
CTCTTTATGATCTAGGTGCTATCAGCATGCGTATGTTGACTAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTGCCTCATGGTTTGACAGAGCGCCGCTCTACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

94.048

100

0.94

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.323

99.405

0.878

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

98.512

0.565