Detailed information NTG0588375

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KEC60_RS14640
• Genome accession: NZ_CP079237
• Coordinates: 3149616..3151148 (-)
• Length: 510 a.a.
• NCBI ID: WP_284649216.1
• Uniprot ID: -
• Organism: Photobacterium damselae strain Pdd1608
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3144616..3156148

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEC60_RS14610 (KEC60_14555)	-	3144630..3145304 (-)	675	WP_065171008.1	FadR/GntR family transcriptional regulator	-
KEC60_RS14615 (KEC60_14560)	-	3145685..3145858 (+)	174	WP_005302173.1	hypothetical protein	-
KEC60_RS14620 (KEC60_14565)	-	3146034..3146300 (+)	267	WP_005302176.1	YihD family protein	-
KEC60_RS14625 (KEC60_14570)	ccoG	3146489..3147826 (+)	1338	WP_370467783.1	cytochrome c oxidase accessory protein CcoG	-
KEC60_RS14630 (KEC60_14575)	-	3147869..3148858 (+)	990	WP_005302181.1	serine/threonine protein kinase	-
KEC60_RS14635 (KEC60_14580)	-	3148948..3149547 (+)	600	WP_370466075.1	thiol:disulfide interchange protein DsbA/DsbL	-
KEC60_RS14640 (KEC60_14585)	comM	3149616..3151148 (-)	1533	WP_284649216.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KEC60_RS14645 (KEC60_14590)	ilvG	3151689..3153335 (+)	1647	WP_284649217.1	acetolactate synthase 2 catalytic subunit	-
KEC60_RS14650 (KEC60_14595)	ilvM	3153338..3153595 (+)	258	WP_044180383.1	acetolactate synthase 2 small subunit	-
KEC60_RS14655 (KEC60_14600)	-	3153635..3154564 (+)	930	WP_065171002.1	branched-chain amino acid transaminase	-

Sequence

Protein

• Length: 510 a.a.
• Molecular weight: 55149.45 Da
• Isoelectric Point: 8.2787

>NTDB_id=588375 KEC60_RS14640 WP_284649216.1 3149616..3151148(-) (comM) [Photobacterium damselae strain Pdd1608]
MSLAIVHSRACVGVQAPAVTVEVHLSNGMPSFTLVGLPETTVKEAKDRVRSAIFNANFEFPSRRITVNLAPADLPKEGGR
FDLPIALGILAASGQIPAESLHKYEFLGELALSGQLRPVKGALPAALAALKAKRCLIVPDRNGDQVALVGEKQHKSAPDL
IQVCAHLLGQQSLSLRFQTKPDDDSLDLTQGRDMQDIIGQQQGKRALEIAAAGGHNLLFLGPPGTGKTMLASRLCDLLPP
MSHDEALETAAVASLTQQSIHQGNWLQRPLRAPHHSSSMAALVGGGSIPRPGEISLAHNGILFLDEMPEFERKVLDSLRE
PLESGEIVISRATSKATFPANFQLIGALNPSPTGFYEGAQTRTNPQVILRYLSKLSGPLLDRFDMSIEIPALPKGTLAQG
GERGESTPVIKARVNQARTLMDQRAGKVNARLSTRELDKHCALAREDAEFLENALHQLGLSIRAYHRIIKVARTIADLSN
CEQIERAHLAEALGYRAMDRLLKQLTVQAI

Nucleotide

• Length: 1533 bp

>NTDB_id=588375 KEC60_RS14640 WP_284649216.1 3149616..3151148(-) (comM) [Photobacterium damselae strain Pdd1608]
ATGTCATTGGCCATTGTGCATAGCCGGGCTTGCGTTGGGGTACAAGCTCCAGCAGTAACTGTTGAAGTTCATTTAAGTAA
TGGAATGCCCAGTTTTACTCTGGTGGGTTTACCTGAGACAACGGTAAAAGAGGCCAAAGATCGGGTTCGAAGTGCCATTT
TTAATGCCAATTTTGAGTTTCCCTCTCGGCGAATTACCGTCAATTTAGCTCCCGCTGATTTGCCTAAAGAAGGGGGCCGA
TTTGACTTACCCATTGCACTTGGAATTTTAGCTGCTTCCGGACAAATCCCCGCAGAATCGCTGCATAAATATGAGTTTTT
AGGGGAGTTGGCCTTATCGGGGCAATTGCGTCCGGTAAAGGGGGCGCTGCCTGCTGCTCTTGCTGCATTAAAGGCGAAAA
GGTGTTTGATTGTCCCTGATCGTAATGGCGATCAAGTGGCATTAGTAGGCGAAAAACAACATAAGTCAGCGCCTGATTTG
ATCCAAGTTTGCGCTCACCTATTAGGACAGCAAAGTTTATCTTTACGCTTTCAAACAAAACCCGATGATGATTCGTTAGA
TCTGACTCAGGGGCGAGATATGCAAGATATTATTGGTCAGCAGCAAGGTAAGCGGGCATTGGAAATTGCAGCTGCCGGTG
GCCATAACCTTCTGTTTCTTGGGCCGCCAGGAACGGGAAAAACCATGTTAGCCTCTCGCTTATGTGATTTATTACCTCCT
ATGAGCCATGATGAGGCGTTAGAAACCGCAGCTGTTGCCTCGCTGACTCAGCAGAGCATTCATCAAGGCAATTGGTTACA
ACGACCGCTACGTGCACCTCATCATTCAAGCTCTATGGCTGCCTTAGTTGGTGGTGGTTCAATTCCAAGGCCGGGGGAGA
TCTCTTTGGCGCATAACGGCATTCTTTTTTTAGATGAAATGCCCGAATTTGAGCGTAAGGTTTTGGACTCATTACGTGAA
CCTTTAGAGTCGGGAGAGATTGTGATTTCTCGGGCAACCAGTAAAGCAACCTTTCCGGCAAATTTTCAATTGATTGGAGC
GCTAAATCCGAGTCCAACAGGATTTTATGAAGGCGCACAAACTCGAACTAATCCTCAAGTTATTTTGCGCTATCTCAGTA
AGCTCTCTGGCCCGCTGCTTGATAGGTTTGATATGTCGATTGAGATCCCTGCTCTGCCGAAAGGTACTTTAGCTCAAGGT
GGTGAGCGCGGTGAGAGTACTCCAGTGATTAAAGCGCGAGTTAATCAGGCGCGAACCTTAATGGATCAGCGAGCAGGAAA
AGTGAATGCTCGACTTTCGACTCGGGAGTTAGATAAACATTGCGCTCTGGCTCGAGAAGATGCGGAGTTTCTTGAAAATG
CATTGCATCAGTTGGGGCTATCGATTCGTGCGTACCACCGCATTATTAAGGTGGCACGAACCATTGCCGATTTAAGTAAT
TGTGAGCAGATAGAGCGAGCGCATTTAGCTGAAGCGTTAGGATATCGAGCGATGGATCGGTTATTGAAGCAGTTAACAGT
TCAAGCGATATGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (193-394)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	76.667	100	0.767
comM	Vibrio cholerae strain A1552	76.275	100	0.763
comM	Glaesserella parasuis strain SC1401	63.834	99.216	0.633
comM	Haemophilus influenzae Rd KW20	62.722	99.412	0.624
comM	Legionella pneumophila str. Paris	49.699	97.843	0.486
comM	Legionella pneumophila strain ERS1305867	49.699	97.843	0.486
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.083	99.216	0.427