Detailed information
Bioinformatically predicted
Overview
| Name | comB7 | Type | Machinery gene |
| Locus tag | K750_RS07760 | Genome accession | NC_021217 |
| Coordinates | 1600896..1601009 (+) | Length | 37 a.a. |
| NCBI ID | WP_001217873.1 | Uniprot ID | G2MCV1 |
| Organism | Helicobacter pylori UM037 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1595896..1606009
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K750_RS07735 (K750_00020) | - | 1595949..1598174 (+) | 2226 | WP_021299548.1 | AAA family ATPase | - |
| K750_RS07740 (K750_00015) | panD | 1598164..1598517 (+) | 354 | WP_000142235.1 | aspartate 1-decarboxylase | - |
| K750_RS07745 (K750_00010) | - | 1598520..1598822 (+) | 303 | WP_000347926.1 | YbaB/EbfC family nucleoid-associated protein | - |
| K750_RS07750 (K750_00005) | - | 1598822..1599817 (+) | 996 | WP_015643461.1 | PDZ domain-containing protein | - |
| K750_RS07755 (K750_09110) | comB6 | 1599825..1600880 (+) | 1056 | WP_015644758.1 | P-type conjugative transfer protein TrbL | Machinery gene |
| K750_RS07760 (K750_09115) | comB7 | 1600896..1601009 (+) | 114 | WP_001217873.1 | hypothetical protein | Machinery gene |
| K750_RS07765 (K750_09120) | comB8 | 1601006..1601749 (+) | 744 | WP_015644757.1 | type IV secretion system protein | Machinery gene |
| K750_RS07770 (K750_09125) | comB9 | 1601749..1602723 (+) | 975 | WP_015644756.1 | TrbG/VirB9 family P-type conjugative transfer protein | Machinery gene |
| K750_RS07775 (K750_09130) | comB10 | 1602716..1603852 (+) | 1137 | WP_015644755.1 | DNA type IV secretion system protein ComB10 | Machinery gene |
| K750_RS07780 (K750_09135) | - | 1603922..1605334 (+) | 1413 | WP_015644754.1 | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - |
Sequence
Protein
Download Length: 37 a.a. Molecular weight: 4325.25 Da Isoelectric Point: 9.3572
>NTDB_id=58728 K750_RS07760 WP_001217873.1 1600896..1601009(+) (comB7) [Helicobacter pylori UM037]
MRIFFVIMGLVFFGCTSKVHEMKKSPCTLYENRLNLA
MRIFFVIMGLVFFGCTSKVHEMKKSPCTLYENRLNLA
Nucleotide
Download Length: 114 bp
>NTDB_id=58728 K750_RS07760 WP_001217873.1 1600896..1601009(+) (comB7) [Helicobacter pylori UM037]
ATGAGAATTTTTTTTGTTATTATGGGACTTGTGTTTTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTG
CACCTTGTATGAAAACAGGTTAAATCTCGCATGA
ATGAGAATTTTTTTTGTTATTATGGGACTTGTGTTTTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTG
CACCTTGTATGAAAACAGGTTAAATCTCGCATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB7 | Helicobacter pylori P1 |
100 |
100 |
1 |