Detailed information NTG0058692

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K749_RS01120
• Genome accession: NC_021216
• Coordinates: 222930..223730 (-)
• Length: 266 a.a.
• NCBI ID: WP_015645361.1
• Uniprot ID: -
• Organism: Helicobacter pylori UM299
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 217930..228730

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K749_RS01085 (K749_03945)	-	218789..219574 (-)	786	WP_015645355.1	hypothetical protein	-
K749_RS01090 (K749_03950)	-	219574..219960 (-)	387	WP_015645356.1	DUF1294 domain-containing protein	-
K749_RS07870 (K749_03955)	-	220280..220441 (-)	162	WP_014536434.1	lysozyme	-
K749_RS07875 (K749_03960)	-	220507..220956 (-)	450	WP_015645357.1	glycoside hydrolase family protein	-
K749_RS01100 (K749_03965)	-	220967..221527 (-)	561	WP_015645358.1	hypothetical protein	-
K749_RS01105 (K749_03970)	-	221511..221849 (-)	339	WP_000699911.1	hypothetical protein	-
K749_RS01110 (K749_09050)	-	222038..222400 (-)	363	Protein_223	tetratricopeptide repeat protein	-
K749_RS01115 (K749_03980)	dprB	222529..222933 (-)	405	WP_015645360.1	Holliday junction resolvase RuvX	Machinery gene
K749_RS01120 (K749_03985)	dprA	222930..223730 (-)	801	WP_015645361.1	DNA-processing protein DprA	Machinery gene
K749_RS01125 (K749_03990)	minE	223742..223975 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
K749_RS01130 (K749_03995)	minD	223972..224778 (-)	807	WP_001019098.1	septum site-determining protein MinD	-
K749_RS01135 (K749_04000)	ilvC	224802..225794 (-)	993	WP_015645362.1	ketol-acid reductoisomerase	-
K749_RS01145 (K749_04005)	-	226042..226824 (+)	783	WP_015645363.1	NAD+ synthase	-
K749_RS01150 (K749_04010)	-	226821..227759 (+)	939	WP_015645364.1	tetraacyldisaccharide 4'-kinase	-
K749_RS01155 (K749_04015)	pseH	227692..228234 (-)	543	WP_015645365.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29714.67 Da
• Isoelectric Point: 9.1505

>NTDB_id=58692 K749_RS01120 WP_015645361.1 222930..223730(-) (dprA) [Helicobacter pylori UM299]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTVTLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKGFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEKKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=58692 K749_RS01120 WP_015645361.1 222930..223730(-) (dprA) [Helicobacter pylori UM299]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGCGTGGGCGATATAAAGCTTTTAGATGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCGTCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCCTGCAGTTTGGATTTAATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGGTTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAATCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCTAGACTCGCCCAAAAATACCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAAAGAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATACGAGCTGTTGGGCAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41