Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   EGT69_RS13215 Genome accession   NZ_CP078018
Coordinates   2771036..2771461 (-) Length   141 a.a.
NCBI ID   WP_039047742.1    Uniprot ID   -
Organism   Acinetobacter junii strain AJ_351     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2766036..2776461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT69_RS13185 (EGT69_013185) - 2766113..2766382 (-) 270 WP_039047744.1 HPr family phosphocarrier protein -
  EGT69_RS13190 (EGT69_013190) rapZ 2766379..2767230 (-) 852 WP_004906708.1 RNase adapter RapZ -
  EGT69_RS13195 (EGT69_013195) panC 2767260..2768105 (-) 846 WP_004960706.1 pantoate--beta-alanine ligase -
  EGT69_RS13200 (EGT69_013200) panB 2768109..2768918 (-) 810 WP_004906704.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  EGT69_RS13205 (EGT69_013205) folK 2768958..2769446 (-) 489 WP_004960709.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  EGT69_RS13210 (EGT69_013210) pcnB 2769443..2770897 (-) 1455 WP_039047743.1 polynucleotide adenylyltransferase PcnB -
  EGT69_RS13215 (EGT69_013215) comEA 2771036..2771461 (-) 426 WP_039047742.1 ComEA family DNA-binding protein Machinery gene
  EGT69_RS13220 (EGT69_013220) mazG 2771430..2772236 (-) 807 WP_039047741.1 nucleoside triphosphate pyrophosphohydrolase -
  EGT69_RS13225 (EGT69_013225) - 2772335..2773108 (+) 774 WP_039047740.1 SDR family oxidoreductase -
  EGT69_RS13230 (EGT69_013230) - 2773148..2775454 (-) 2307 WP_004960720.1 RelA/SpoT family protein -

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 16203.65 Da        Isoelectric Point: 10.5292

>NTDB_id=586382 EGT69_RS13215 WP_039047742.1 2771036..2771461(-) (comEA) [Acinetobacter junii strain AJ_351]
MILSKPRSRHNLFILILLWLGCYTSGYAQQFDQSYEKWKAQQQARDQQLAKQPNNSYYLSRPSQQNTKQFSSSINIQSDK
ISLNQANLEQLQTLNGVGQKKAQAIIEYRQKKGGFKTIDELMNVKGIGPKLLEKNKAKLIL

Nucleotide


Download         Length: 426 bp        

>NTDB_id=586382 EGT69_RS13215 WP_039047742.1 2771036..2771461(-) (comEA) [Acinetobacter junii strain AJ_351]
ATGATTTTGTCGAAGCCACGCAGCAGACATAATCTATTTATACTGATTTTACTATGGCTTGGGTGTTATACAAGTGGTTA
TGCGCAGCAATTTGATCAATCTTATGAAAAGTGGAAAGCTCAACAGCAAGCGCGTGACCAGCAGTTAGCTAAACAGCCCA
ACAATAGTTACTATTTATCAAGACCTAGTCAGCAAAACACCAAACAATTTTCATCTTCTATAAATATTCAGTCAGATAAA
ATTAGTTTGAATCAGGCAAATCTAGAACAGTTACAAACTTTGAATGGAGTGGGACAGAAAAAAGCTCAAGCAATCATTGA
ATACCGCCAAAAGAAGGGTGGTTTTAAAACAATAGATGAATTAATGAATGTAAAAGGAATCGGGCCAAAACTGCTTGAGA
AGAATAAAGCAAAGCTCATACTTTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(78-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

50.746

95.035

0.482
  comEA Acinetobacter baumannii D1279779

49.254

95.035

0.468
  comEA Acinetobacter baylyi ADP1

42.222

95.745

0.404