Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   KV238_RS00315 Genome accession   NZ_CP078012
Coordinates   66152..67153 (-) Length   333 a.a.
NCBI ID   WP_012516008.1    Uniprot ID   A1E373
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_18-036     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 61152..72153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KV238_RS00300 (KV238_00300) - 61976..63310 (-) 1335 WP_230923670.1 glycosyltransferase family 4 protein -
  KV238_RS00305 (KV238_00305) - 63312..64310 (-) 999 WP_230923671.1 glycosyltransferase family 4 protein -
  KV238_RS00310 (KV238_00310) - 64607..66082 (-) 1476 WP_043052265.1 alpha-amylase -
  KV238_RS00315 (KV238_00315) ccpA 66152..67153 (-) 1002 WP_012516008.1 catabolite control protein A Regulator
  KV238_RS00320 (KV238_00320) - 67327..68412 (+) 1086 WP_038674132.1 M24 family metallopeptidase -
  KV238_RS00325 (KV238_00325) - 68440..68622 (+) 183 WP_111710699.1 hypothetical protein -
  KV238_RS00330 (KV238_00330) - 68770..69438 (+) 669 WP_043039187.1 NAD(P)H-dependent oxidoreductase -
  KV238_RS00335 (KV238_00335) - 69553..70479 (+) 927 WP_111710700.1 glycosyltransferase family 2 protein -
  KV238_RS00340 (KV238_00340) - 70463..70651 (-) 189 WP_111690296.1 hypothetical protein -
  KV238_RS00345 (KV238_00345) smpB 70763..71230 (-) 468 WP_043984178.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36631.75 Da        Isoelectric Point: 5.7642

>NTDB_id=586224 KV238_RS00315 WP_012516008.1 66152..67153(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=586224 KV238_RS00315 WP_012516008.1 66152..67153(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTCGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATTCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGTGATGAGGACGATGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTCGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGGGCAGAGTTTTCTCGTTCGCGTACGCCAATCGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGATATTTTAGCTAAAGATCATCAAAGCATTGCCTTTGTTTC
AGGGCCGCTTATTGATGATATCAATGGAAAGGTGCGTTTAGCTGGATACAAGGACGGACTTAAGAAGAACAAGCTTGACT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCTTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAGGCTGGTAAGCGTGTTCC
AGAAGACTTTGAGATTATCACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CGGTCTATGACTTGGGGGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A1E373

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

76.877

100

0.769

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547