Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KV238_RS00205 Genome accession   NZ_CP078012
Coordinates   41501..42310 (-) Length   269 a.a.
NCBI ID   WP_043040861.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_18-036     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 36501..47310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KV238_RS00195 (KV238_00190) - 37615..39546 (+) 1932 WP_230923663.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -
  KV238_RS00200 (KV238_00195) - 39567..41309 (-) 1743 WP_230923664.1 restriction endonuclease FokI C-terminal domain-containing protein -
  KV238_RS00205 (KV238_00200) vicX 41501..42310 (-) 810 WP_043040861.1 MBL fold metallo-hydrolase Regulator
  KV238_RS00210 (KV238_00205) vicK 42314..43666 (-) 1353 WP_012677636.1 cell wall metabolism sensor histidine kinase VicK Regulator
  KV238_RS00215 (KV238_00210) vicR 43659..44369 (-) 711 WP_012515994.1 response regulator YycF Regulator
  KV238_RS00220 (KV238_00215) - 44568..45587 (-) 1020 WP_043040868.1 DUF3114 domain-containing protein -
  KV238_RS00225 (KV238_00220) - 45632..46894 (-) 1263 WP_043040863.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29964.99 Da        Isoelectric Point: 5.5346

>NTDB_id=586221 KV238_RS00205 WP_043040861.1 41501..42310(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVAQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNRSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTASPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=586221 KV238_RS00205 WP_043040861.1 41501..42310(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGATCGACAGGTAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACCAGTCTCCTTGCTGAGATTGATAGAAAGCCTGAGGATT
TAGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGCGTTGGAATCATGGCTCGAAAATATAACCTAGAC
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGATGTAGCACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAGGTCCTTTGTCATGCTGACAGATACAGGATATGTGAGTGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCTGGCGCTATGATTCGAAGCTTGGGCA
ATAAAACAAAGAAAATCTACCTCGGTCACCTAAGCCAGGAGAACAATATCAAAGAATTAGCACACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCAGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751