Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   KVP03_RS07610 Genome accession   NZ_CP077959
Coordinates   1607017..1607754 (-) Length   245 a.a.
NCBI ID   WP_043040551.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_14-145     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1602017..1612754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVP03_RS10595 - 1602217..1602348 (-) 132 WP_228269170.1 LPXTG cell wall anchor domain-containing protein -
  KVP03_RS07585 (KVP03_07570) - 1602389..1603069 (-) 681 WP_228269169.1 thioredoxin family protein -
  KVP03_RS07590 (KVP03_07575) - 1603862..1604092 (-) 231 WP_111692439.1 Blp family class II bacteriocin -
  KVP03_RS07595 (KVP03_07580) - 1604354..1605517 (-) 1164 WP_014622845.1 ABC transporter permease subunit -
  KVP03_RS07600 (KVP03_07585) - 1605523..1606377 (-) 855 WP_012515593.1 ABC transporter ATP-binding protein -
  KVP03_RS07605 (KVP03_07590) - 1606444..1606644 (-) 201 WP_042670621.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  KVP03_RS07610 (KVP03_07595) comE/blpR 1607017..1607754 (-) 738 WP_043040551.1 response regulator transcription factor Regulator
  KVP03_RS07615 (KVP03_07600) - 1608504..1608809 (-) 306 WP_111692436.1 AraC family ligand binding domain-containing protein -
  KVP03_RS07620 (KVP03_07605) - 1608811..1609149 (-) 339 WP_014622843.1 cupin domain-containing protein -
  KVP03_RS07625 (KVP03_07610) - 1609177..1609932 (-) 756 WP_043030786.1 class I SAM-dependent methyltransferase -
  KVP03_RS07630 (KVP03_07615) - 1610193..1610648 (+) 456 WP_012515587.1 DUF1836 domain-containing protein -
  KVP03_RS07635 (KVP03_07620) trhA 1610632..1611282 (+) 651 WP_012515586.1 PAQR family membrane homeostasis protein TrhA -
  KVP03_RS07640 (KVP03_07625) - 1611392..1612297 (+) 906 WP_043025804.1 diacylglycerol/lipid kinase family protein -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28930.36 Da        Isoelectric Point: 7.8609

>NTDB_id=585667 KVP03_RS07610 WP_043040551.1 1607017..1607754(-) (comE/blpR) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
MNIFILEDDLGQQFRLEMKIQEILDKHHWTCDRFEVYGKPHQLLANVTERGRHQLFFLDSQIRNDEKKGLAVAREIRKRD
PYALIVFVTTHSELMPVSFRYQVSALDFIDKELSMKHFSDRIERAIIYAYEEQENVTSEGLFIFVTAKAQVQVPFSSLLF
IETSSTPHKLILYSQNERIEFYGFLSEVLKQDPRLVQCHRSYVINPYNVSFLDRDKRLLYFKNGQSCMVSRLKMKALEAS
IKALY

Nucleotide


Download         Length: 738 bp        

>NTDB_id=585667 KVP03_RS07610 WP_043040551.1 1607017..1607754(-) (comE/blpR) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
ATGAATATTTTTATTCTCGAAGATGATCTAGGCCAACAGTTTAGGCTTGAGATGAAGATTCAAGAGATATTGGATAAGCA
TCACTGGACGTGTGATCGTTTTGAAGTTTATGGAAAGCCCCATCAGCTTCTGGCAAATGTTACAGAGAGAGGCAGGCATC
AGCTTTTCTTTCTCGATAGTCAAATTCGAAATGATGAGAAAAAGGGCTTAGCTGTTGCTCGTGAGATTAGAAAGCGTGAC
CCTTACGCTCTCATTGTTTTTGTCACGACACATTCTGAGCTTATGCCAGTTTCTTTTCGTTATCAGGTGTCTGCTCTAGA
TTTTATCGATAAGGAATTGTCAATGAAACATTTCTCAGATAGGATTGAAAGAGCCATTATATATGCTTATGAAGAGCAAG
AAAATGTAACCTCAGAGGGCTTATTTATTTTTGTAACGGCTAAGGCTCAGGTGCAGGTTCCTTTTTCAAGCCTATTGTTC
ATTGAGACCTCTAGTACTCCTCACAAGTTGATTTTGTATTCTCAAAACGAGCGAATAGAATTTTATGGCTTTCTTTCAGA
GGTTCTTAAGCAAGATCCCAGACTAGTCCAATGTCATCGTTCTTATGTTATCAATCCTTACAATGTTTCGTTTCTTGATC
GTGATAAGCGTTTACTCTATTTCAAGAATGGGCAGTCTTGCATGGTTTCAAGACTAAAAATGAAAGCACTTGAGGCGTCT
ATTAAGGCTTTGTATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

54.132

98.776

0.535

  comE/comE1 Streptococcus equinus JB1

45.041

98.776

0.445

  comE/comE2 Streptococcus equinus JB1

36.885

99.592

0.367